RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C RPL33AP05744 107 aaKnown RBP3.16□□□□□ -1.9
CLF1YLR117C RPL33BP41056 107 aaKnown RBP3.16□□□□□ -1.9
CLF1YLR117C PRP8P33334 2413 aaKnown RBP3.15□□□□□ -1.9
CLF1YLR117C RPL43AP0CX25 92 aaKnown RBP3.15□□□□□ -1.9
CLF1YLR117C RPL43BP0CX26 92 aa3.15□□□□□ -1.9
CLF1YLR117C GIS2P53849 153 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
CLF1YLR117C CUP1-1P0CX80 61 aa3.14□□□□□ -1.91
CLF1YLR117C CUP1-2P0CX81 61 aa3.14□□□□□ -1.91
CLF1YLR117C YDR115WQ04598 105 aa3.13□□□□□ -1.91
CLF1YLR117C YBR201C-AQ2V2Q3 67 aa3.13□□□□□ -1.91
CLF1YLR117C Q0297Q9ZZV8 51 aa3.13□□□□□ -1.91
CLF1YLR117C MEC1P38111 2368 aa3.12□□□□□ -1.91
CLF1YLR117C URA2P07259 2214 aaKnown RBP3.11□□□□□ -1.91
CLF1YLR117C YJR128WP47162 119 aa3.11□□□□□ -1.91
CLF1YLR117C YMR230W-AQ3E7B5 62 aa3.11□□□□□ -1.91
CLF1YLR117C YDR210WQ03482 75 aa3.1□□□□□ -1.91
CLF1YLR117C YOL097W-AQ3E7Y9 61 aa3.1□□□□□ -1.91
CLF1YLR117C YLR255CO13574 117 aa3.09□□□□□ -1.91
CLF1YLR117C YGR146C-AQ8TGT9 53 aa3.09□□□□□ -1.91
CLF1YLR117C YCR041WP37265 110 aa3.08□□□□□ -1.92
CLF1YLR117C COX8P04039 78 aa3.08□□□□□ -1.92
CLF1YLR117C YGL041C-BQ3E750 60 aa3.07□□□□□ -1.92
CLF1YLR117C YHR212W-AP0CX91 67 aa3.07□□□□□ -1.92
CLF1YLR117C YCL042WP25572 119 aa3.07□□□□□ -1.92
CLF1YLR117C YLL066W-BQ8TGJ7 56 aa3.06□□□□□ -1.92
CLF1YLR117C YEL014CP39999 101 aa3.04□□□□□ -1.92
CLF1YLR117C YER078W-AQ3E7A2 54 aa3.04□□□□□ -1.92
CLF1YLR117C CMC4Q3E7A9 73 aa3.02□□□□□ -1.93
CLF1YLR117C RPL37BP51402 88 aaKnown RBP3.01□□□□□ -1.93
CLF1YLR117C YOR394C-AQ8TGJ0 55 aa3□□□□□ -1.93
CLF1YLR117C YER175W-AQ8TGU4 54 aa3□□□□□ -1.93
CLF1YLR117C YHR073W-AP0C5N7 58 aa3□□□□□ -1.93
CLF1YLR117C YOR316C-AQ3E806 69 aa2.99□□□□□ -1.93
CLF1YLR117C NUM1Q00402 2748 aa2.98□□□□□ -1.93
CLF1YLR117C OLI1P61829 76 aa2.97□□□□□ -1.93
CLF1YLR117C YCR108CQ3E819 63 aa2.96□□□□□ -1.94
CLF1YLR117C YBR016WP38216 128 aa2.94□□□□□ -1.94
CLF1YLR117C YBL044WP38194 122 aa2.92□□□□□ -1.94
CLF1YLR117C YJR085CP47131 105 aaKnown RBP2.92□□□□□ -1.94
CLF1YLR117C COX7P10174 60 aa2.89□□□□□ -1.95
CLF1YLR117C YPR195CQ06594 109 aa2.89□□□□□ -1.95
CLF1YLR117C YJL144WP47009 104 aa2.88□□□□□ -1.95
CLF1YLR117C YHR032W-AP0C5N6 59 aa2.85□□□□□ -1.95
CLF1YLR117C DYN1P36022 4092 aa2.84□□□□□ -1.95
CLF1YLR117C YDR034C-AP0C289 58 aa2.83□□□□□ -1.96
CLF1YLR117C UTP20P35194 2493 aaKnown RBP2.82□□□□□ -1.96
CLF1YLR117C LCL1Q02786 101 aa2.77□□□□□ -1.97
CLF1YLR117C YFL067WP43537 175 aa2.73□□□□□ -1.97
CLF1YLR117C RPL37AP49166 88 aaKnown RBP2.72□□□□□ -1.97
CLF1YLR117C YBR072C-AQ3E794 53 aa2.7□□□□□ -1.98
CLF1YLR117C HHY1P39982 102 aa2.67□□□□□ -1.98
CLF1YLR117C YAL067W-AQ8TGK6 75 aa2.65□□□□□ -1.98
CLF1YLR117C YOR072W-BQ3E832 53 aa2.65□□□□□ -1.99
CLF1YLR117C YJL009WP47078 108 aa2.61□□□□□ -1.99
CLF1YLR117C MDN1Q12019 4910 aaKnown RBP2.44□□□□□ -2.02
CLF1YLR117C YML054C-AQ3E809 52 aa2.44□□□□□ -2.02
CLF1YLR117C Q0017Q9ZZX8 53 aa2.35□□□□□ -2.03
CLF1YLR117C YOL164W-AQ3E7A5 60 aa2.34□□□□□ -2.03
CLF1YLR117C YHR086W-AQ3E746 53 aa2.13□□□□□ -2.07
CLF1YLR117C YHR050W-AQ05451 56 aa2.06□□□□□ -2.08
CLF1YLR117C YLR157W-EP0CF00 54 aa2□□□□□ -2.09
CLF1YLR117C RPS29AP41057 56 aaKnown RBP1.93□□□□□ -2.1
CLF1YLR117C RPS29BP41058 56 aaKnown RBP1.71□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 41.6 ms