RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YPR195CQ06594 109 aa1.29□□□□□ -2.2
UFD4YKL010C YLR157W-DP0CE99 70 aa1.29□□□□□ -2.2
UFD4YKL010C YBL008W-AQ3E821 79 aa1.28□□□□□ -2.2
UFD4YKL010C HUB1Q6Q546 73 aa1.28□□□□□ -2.2
UFD4YKL010C YGR146C-AQ8TGT9 53 aa1.28□□□□□ -2.2
UFD4YKL010C YFL067WP43537 175 aa1.28□□□□□ -2.21
UFD4YKL010C YER188C-AP0C0V2 99 aa1.27□□□□□ -2.21
UFD4YKL010C YCR043CP25361 127 aa1.27□□□□□ -2.21
UFD4YKL010C YBR016WP38216 128 aa1.27□□□□□ -2.21
UFD4YKL010C SDH6Q3E785 79 aa1.27□□□□□ -2.21
UFD4YKL010C YMR122CQ03879 124 aa1.26□□□□□ -2.21
UFD4YKL010C YOR268CQ08734 132 aa1.26□□□□□ -2.21
UFD4YKL010C RPL37BP51402 88 aaKnown RBP1.26□□□□□ -2.21
UFD4YKL010C YOR316C-AQ3E806 69 aa1.26□□□□□ -2.21
UFD4YKL010C YMR001C-AQ8TGS9 76 aa1.26□□□□□ -2.21
UFD4YKL010C YGL149WP53116 101 aa1.25□□□□□ -2.21
UFD4YKL010C YJR128WP47162 119 aa1.25□□□□□ -2.21
UFD4YKL010C ATP17Q06405 101 aa1.24□□□□□ -2.21
UFD4YKL010C YNL277W-AQ3E7Z0 62 aa1.24□□□□□ -2.21
UFD4YKL010C YNL122CP53921 115 aaPredicted RBP1.24□□□□□ -2.21
UFD4YKL010C YOR381W-AQ3E804 55 aa1.23□□□□□ -2.21
UFD4YKL010C YFR032C-BQ8TGU2 87 aa1.23□□□□□ -2.21
UFD4YKL010C OST5Q92316 86 aa1.22□□□□□ -2.21
UFD4YKL010C YIL102CP40488 101 aa1.21□□□□□ -2.22
UFD4YKL010C MRX7P53869 86 aa1.21□□□□□ -2.22
UFD4YKL010C COX7P10174 60 aa1.2□□□□□ -2.22
UFD4YKL010C COX8P04039 78 aa1.2□□□□□ -2.22
UFD4YKL010C YDR010CQ12426 110 aa1.19□□□□□ -2.22
UFD4YKL010C YBR201C-AQ2V2Q3 67 aa1.17□□□□□ -2.22
UFD4YKL010C FYV12Q08559 129 aa1.16□□□□□ -2.22
UFD4YKL010C YCR095W-AQ3E787 52 aa1.16□□□□□ -2.22
UFD4YKL010C DDR48P18899 430 aaKnown RBP1.16□□□□□ -2.22
UFD4YKL010C YML100W-AQ8TGT0 57 aa1.16□□□□□ -2.22
UFD4YKL010C YIL156W-BQ2V2P4 73 aa1.15□□□□□ -2.22
UFD4YKL010C OLI1P61829 76 aa1.15□□□□□ -2.23
UFD4YKL010C QCR10P37299 77 aa1.15□□□□□ -2.23
UFD4YKL010C Q0017Q9ZZX8 53 aa1.15□□□□□ -2.23
UFD4YKL010C RPL37AP49166 88 aaKnown RBP1.13□□□□□ -2.23
UFD4YKL010C YJL144WP47009 104 aa1.13□□□□□ -2.23
UFD4YKL010C YGL034CP53186 121 aa1.13□□□□□ -2.23
UFD4YKL010C CMC4Q3E7A9 73 aa1.12□□□□□ -2.23
UFD4YKL010C YOR394C-AQ8TGJ0 55 aa1.1□□□□□ -2.23
UFD4YKL010C YGL014C-AP0C5N1 53 aa1.09□□□□□ -2.23
UFD4YKL010C YJL009WP47078 108 aa1.09□□□□□ -2.23
UFD4YKL010C YDR210WQ03482 75 aa1.08□□□□□ -2.24
UFD4YKL010C YCR108CQ3E819 63 aa1.08□□□□□ -2.24
UFD4YKL010C YER078W-AQ3E7A2 54 aa1.07□□□□□ -2.24
UFD4YKL010C YML054C-AQ3E809 52 aa1.07□□□□□ -2.24
UFD4YKL010C YOR376W-AQ3E805 51 aa1.04□□□□□ -2.24
UFD4YKL010C YAL067W-AQ8TGK6 75 aa1.04□□□□□ -2.24
UFD4YKL010C YBL044WP38194 122 aa1.04□□□□□ -2.24
UFD4YKL010C YEL014CP39999 101 aa1.02□□□□□ -2.25
UFD4YKL010C YBR072C-AQ3E794 53 aa1.02□□□□□ -2.25
UFD4YKL010C SOM1Q05676 74 aa1□□□□□ -2.25
UFD4YKL010C YOR072W-BQ3E832 53 aa1□□□□□ -2.25
UFD4YKL010C YHR032W-AP0C5N6 59 aa0.97□□□□□ -2.25
UFD4YKL010C HHY1P39982 102 aa0.92□□□□□ -2.26
UFD4YKL010C RPS29AP41057 56 aaKnown RBP0.85□□□□□ -2.27
UFD4YKL010C RPS29BP41058 56 aaKnown RBP0.85□□□□□ -2.27
UFD4YKL010C YHR086W-AQ3E746 53 aa0.82□□□□□ -2.28
UFD4YKL010C YHR050W-AQ05451 56 aa0.81□□□□□ -2.28
UFD4YKL010C YOL164W-AQ3E7A5 60 aa0.69□□□□□ -2.3
UFD4YKL010C YLR157W-EP0CF00 54 aa0.57□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms