RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W YGL041C-BQ3E750 60 aa2.22□□□□□ -2.05
NUP85YJR042W Q0032Q9ZZX7 96 aa2.22□□□□□ -2.05
NUP85YJR042W YDR210WQ03482 75 aa2.22□□□□□ -2.05
NUP85YJR042W YDR182W-AQ3E796 67 aa2.21□□□□□ -2.06
NUP85YJR042W YHR213W-BQ8TGK1 99 aa2.21□□□□□ -2.06
NUP85YJR042W YJL133C-AQ3E7A3 74 aa2.2□□□□□ -2.06
NUP85YJR042W UTP20P35194 2493 aaKnown RBP2.2□□□□□ -2.06
NUP85YJR042W YIL156W-BQ2V2P4 73 aa2.19□□□□□ -2.06
NUP85YJR042W NOP10Q6Q547 58 aaPredicted RBP2.19□□□□□ -2.06
NUP85YJR042W CUP1-1P0CX80 61 aa2.19□□□□□ -2.06
NUP85YJR042W CUP1-2P0CX81 61 aa2.19□□□□□ -2.06
NUP85YJR042W AUA1P32450 94 aa2.18□□□□□ -2.06
NUP85YJR042W MRX7P53869 86 aa2.18□□□□□ -2.06
NUP85YJR042W DDR2P89113 61 aa2.18□□□□□ -2.06
NUP85YJR042W YOR072WQ08486 104 aa2.18□□□□□ -2.06
NUP85YJR042W YDR010CQ12426 110 aa2.18□□□□□ -2.06
NUP85YJR042W YOL166W-AQ8TGJ1 51 aa2.18□□□□□ -2.06
NUP85YJR042W BSC4P53841 131 aa2.17□□□□□ -2.06
NUP85YJR042W YER188C-AP0C0V2 99 aa2.17□□□□□ -2.06
NUP85YJR042W GIS2P53849 153 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
NUP85YJR042W NUM1Q00402 2748 aa2.16□□□□□ -2.06
NUP85YJR042W DYN1P36022 4092 aa2.15□□□□□ -2.07
NUP85YJR042W YGR121W-AQ3E816 71 aa2.14□□□□□ -2.07
NUP85YJR042W YOL013W-AP0C272 63 aaPredicted RBP2.14□□□□□ -2.07
NUP85YJR042W LCL1Q02786 101 aa2.14□□□□□ -2.07
NUP85YJR042W YIL102CP40488 101 aa2.13□□□□□ -2.07
NUP85YJR042W YDR034C-AP0C289 58 aa2.12□□□□□ -2.07
NUP85YJR042W RPS30AP0CX33 63 aaKnown RBP2.12□□□□□ -2.07
NUP85YJR042W RPS30BP0CX34 63 aaKnown RBP2.12□□□□□ -2.07
NUP85YJR042W YAR064WP39563 99 aa2.12□□□□□ -2.07
NUP85YJR042W YKL065W-AQ2V2P2 73 aa2.11□□□□□ -2.07
NUP85YJR042W YOL097W-AQ3E7Y9 61 aa2.1□□□□□ -2.07
NUP85YJR042W YLR157W-DP0CE99 70 aa2.1□□□□□ -2.07
NUP85YJR042W SDH6Q3E785 79 aa2.08□□□□□ -2.08
NUP85YJR042W HUB1Q6Q546 73 aa2.07□□□□□ -2.08
NUP85YJR042W YNL122CP53921 115 aaPredicted RBP2.05□□□□□ -2.08
NUP85YJR042W YHR073W-AP0C5N7 58 aa2.05□□□□□ -2.08
NUP85YJR042W YMR001C-AQ8TGS9 76 aa2.05□□□□□ -2.08
NUP85YJR042W YBR201C-AQ2V2Q3 67 aa2.02□□□□□ -2.09
NUP85YJR042W YJR128WP47162 119 aa2.01□□□□□ -2.09
NUP85YJR042W YGR146C-AQ8TGT9 53 aa2.01□□□□□ -2.09
NUP85YJR042W YJL009WP47078 108 aa1.99□□□□□ -2.09
NUP85YJR042W YOR316C-AQ3E806 69 aa1.99□□□□□ -2.09
NUP85YJR042W ATP17Q06405 101 aa1.97□□□□□ -2.09
NUP85YJR042W COX7P10174 60 aa1.96□□□□□ -2.1
NUP85YJR042W YBR016WP38216 128 aa1.94□□□□□ -2.1
NUP85YJR042W HHY1P39982 102 aa1.94□□□□□ -2.1
NUP85YJR042W OLI1P61829 76 aa1.93□□□□□ -2.1
NUP85YJR042W RPL37BP51402 88 aaKnown RBP1.93□□□□□ -2.1
NUP85YJR042W YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
NUP85YJR042W YCR108CQ3E819 63 aa1.79□□□□□ -2.12
NUP85YJR042W YBL044WP38194 122 aa1.78□□□□□ -2.13
NUP85YJR042W Q0017Q9ZZX8 53 aa1.77□□□□□ -2.13
NUP85YJR042W RPL37AP49166 88 aaKnown RBP1.74□□□□□ -2.13
NUP85YJR042W YML054C-AQ3E809 52 aa1.74□□□□□ -2.13
NUP85YJR042W YBR072C-AQ3E794 53 aa1.73□□□□□ -2.13
NUP85YJR042W MDN1Q12019 4910 aaKnown RBP1.69□□□□□ -2.14
NUP85YJR042W YOR072W-BQ3E832 53 aa1.68□□□□□ -2.14
NUP85YJR042W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
NUP85YJR042W YLR157W-EP0CF00 54 aa1.66□□□□□ -2.14
NUP85YJR042W YHR050W-AQ05451 56 aa1.36□□□□□ -2.19
NUP85YJR042W RPS29BP41058 56 aaKnown RBP1.34□□□□□ -2.19
NUP85YJR042W RPS29AP41057 56 aaKnown RBP1.25□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 7.5 ms