RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W YGL041C-BQ3E750 60 aa2.22□□□□□ -2.05
NUP85YJR042W Q0032Q9ZZX7 96 aa2.22□□□□□ -2.05
NUP85YJR042W YDR210WQ03482 75 aa2.22□□□□□ -2.05
NUP85YJR042W YDR182W-AQ3E796 67 aa2.21□□□□□ -2.06
NUP85YJR042W YHR213W-BQ8TGK1 99 aa2.21□□□□□ -2.06
NUP85YJR042W YJL133C-AQ3E7A3 74 aa2.2□□□□□ -2.06
NUP85YJR042W UTP20P35194 2493 aaKnown RBP2.2□□□□□ -2.06
NUP85YJR042W YIL156W-BQ2V2P4 73 aa2.19□□□□□ -2.06
NUP85YJR042W NOP10Q6Q547 58 aaPredicted RBP2.19□□□□□ -2.06
NUP85YJR042W CUP1-1P0CX80 61 aa2.19□□□□□ -2.06
NUP85YJR042W CUP1-2P0CX81 61 aa2.19□□□□□ -2.06
NUP85YJR042W AUA1P32450 94 aa2.18□□□□□ -2.06
NUP85YJR042W MRX7P53869 86 aa2.18□□□□□ -2.06
NUP85YJR042W DDR2P89113 61 aa2.18□□□□□ -2.06
NUP85YJR042W YOR072WQ08486 104 aa2.18□□□□□ -2.06
NUP85YJR042W YDR010CQ12426 110 aa2.18□□□□□ -2.06
NUP85YJR042W YOL166W-AQ8TGJ1 51 aa2.18□□□□□ -2.06
NUP85YJR042W BSC4P53841 131 aa2.17□□□□□ -2.06
NUP85YJR042W YER188C-AP0C0V2 99 aa2.17□□□□□ -2.06
NUP85YJR042W GIS2P53849 153 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
NUP85YJR042W NUM1Q00402 2748 aa2.16□□□□□ -2.06
NUP85YJR042W DYN1P36022 4092 aa2.15□□□□□ -2.07
NUP85YJR042W YGR121W-AQ3E816 71 aa2.14□□□□□ -2.07
NUP85YJR042W YOL013W-AP0C272 63 aaPredicted RBP2.14□□□□□ -2.07
NUP85YJR042W LCL1Q02786 101 aa2.14□□□□□ -2.07
NUP85YJR042W YIL102CP40488 101 aa2.13□□□□□ -2.07
NUP85YJR042W YDR034C-AP0C289 58 aa2.12□□□□□ -2.07
NUP85YJR042W RPS30AP0CX33 63 aaKnown RBP2.12□□□□□ -2.07
NUP85YJR042W RPS30BP0CX34 63 aaKnown RBP2.12□□□□□ -2.07
NUP85YJR042W YAR064WP39563 99 aa2.12□□□□□ -2.07
NUP85YJR042W YKL065W-AQ2V2P2 73 aa2.11□□□□□ -2.07
NUP85YJR042W YOL097W-AQ3E7Y9 61 aa2.1□□□□□ -2.07
NUP85YJR042W YLR157W-DP0CE99 70 aa2.1□□□□□ -2.07
NUP85YJR042W SDH6Q3E785 79 aa2.08□□□□□ -2.08
NUP85YJR042W HUB1Q6Q546 73 aa2.07□□□□□ -2.08
NUP85YJR042W YNL122CP53921 115 aaPredicted RBP2.05□□□□□ -2.08
NUP85YJR042W YHR073W-AP0C5N7 58 aa2.05□□□□□ -2.08
NUP85YJR042W YMR001C-AQ8TGS9 76 aa2.05□□□□□ -2.08
NUP85YJR042W YBR201C-AQ2V2Q3 67 aa2.02□□□□□ -2.09
NUP85YJR042W YJR128WP47162 119 aa2.01□□□□□ -2.09
NUP85YJR042W YGR146C-AQ8TGT9 53 aa2.01□□□□□ -2.09
NUP85YJR042W YJL009WP47078 108 aa1.99□□□□□ -2.09
NUP85YJR042W YOR316C-AQ3E806 69 aa1.99□□□□□ -2.09
NUP85YJR042W ATP17Q06405 101 aa1.97□□□□□ -2.09
NUP85YJR042W COX7P10174 60 aa1.96□□□□□ -2.1
NUP85YJR042W YBR016WP38216 128 aa1.94□□□□□ -2.1
NUP85YJR042W HHY1P39982 102 aa1.94□□□□□ -2.1
NUP85YJR042W OLI1P61829 76 aa1.93□□□□□ -2.1
NUP85YJR042W RPL37BP51402 88 aaKnown RBP1.93□□□□□ -2.1
NUP85YJR042W YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
NUP85YJR042W YCR108CQ3E819 63 aa1.79□□□□□ -2.12
NUP85YJR042W YBL044WP38194 122 aa1.78□□□□□ -2.13
NUP85YJR042W Q0017Q9ZZX8 53 aa1.77□□□□□ -2.13
NUP85YJR042W RPL37AP49166 88 aaKnown RBP1.74□□□□□ -2.13
NUP85YJR042W YML054C-AQ3E809 52 aa1.74□□□□□ -2.13
NUP85YJR042W YBR072C-AQ3E794 53 aa1.73□□□□□ -2.13
NUP85YJR042W MDN1Q12019 4910 aaKnown RBP1.69□□□□□ -2.14
NUP85YJR042W YOR072W-BQ3E832 53 aa1.68□□□□□ -2.14
NUP85YJR042W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
NUP85YJR042W YLR157W-EP0CF00 54 aa1.66□□□□□ -2.14
NUP85YJR042W YHR050W-AQ05451 56 aa1.36□□□□□ -2.19
NUP85YJR042W RPS29BP41058 56 aaKnown RBP1.34□□□□□ -2.19
NUP85YJR042W RPS29AP41057 56 aaKnown RBP1.25□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms