RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W YBL039W-BP0C268 59 aa2.8□□□□□ -1.96
AVT1YJR001W PRP8P33334 2413 aaKnown RBP2.8□□□□□ -1.96
AVT1YJR001W MVB12P42939 101 aa2.79□□□□□ -1.96
AVT1YJR001W YEL008WP40001 126 aa2.78□□□□□ -1.96
AVT1YJR001W MEC1P38111 2368 aa2.78□□□□□ -1.97
AVT1YJR001W CUP1-1P0CX80 61 aa2.77□□□□□ -1.97
AVT1YJR001W CUP1-2P0CX81 61 aa2.77□□□□□ -1.97
AVT1YJR001W RPL43AP0CX25 92 aaKnown RBP2.77□□□□□ -1.97
AVT1YJR001W RPL43BP0CX26 92 aa2.77□□□□□ -1.97
AVT1YJR001W Q0297Q9ZZV8 51 aa2.77□□□□□ -1.97
AVT1YJR001W YGR025WP53216 100 aa2.75□□□□□ -1.97
AVT1YJR001W YBR200W-AQ3E755 54 aa2.75□□□□□ -1.97
AVT1YJR001W YOR011W-AQ3E807 68 aa2.75□□□□□ -1.97
AVT1YJR001W YCL042WP25572 119 aa2.73□□□□□ -1.97
AVT1YJR001W YOR072WQ08486 104 aa2.73□□□□□ -1.97
AVT1YJR001W COX7P10174 60 aa2.72□□□□□ -1.97
AVT1YJR001W AUA1P32450 94 aa2.72□□□□□ -1.97
AVT1YJR001W YLL006W-AQ3E814 58 aa2.72□□□□□ -1.97
AVT1YJR001W YHR213W-BQ8TGK1 99 aa2.71□□□□□ -1.98
AVT1YJR001W NUM1Q00402 2748 aa2.7□□□□□ -1.98
AVT1YJR001W HOR7Q05827 59 aa2.7□□□□□ -1.98
AVT1YJR001W YJL133C-AQ3E7A3 74 aa2.69□□□□□ -1.98
AVT1YJR001W URA2P07259 2214 aaKnown RBP2.68□□□□□ -1.98
AVT1YJR001W LCL1Q02786 101 aa2.68□□□□□ -1.98
AVT1YJR001W YJL009WP47078 108 aa2.67□□□□□ -1.98
AVT1YJR001W YJR128WP47162 119 aa2.66□□□□□ -1.98
AVT1YJR001W YBR230W-AQ3E762 66 aa2.66□□□□□ -1.98
AVT1YJR001W YOR394C-AQ8TGJ0 55 aa2.66□□□□□ -1.98
AVT1YJR001W YNL146C-AQ3E7Z1 64 aa2.65□□□□□ -1.98
AVT1YJR001W YLR307C-AQ3E825 87 aa2.64□□□□□ -1.99
AVT1YJR001W YAR064WP39563 99 aa2.63□□□□□ -1.99
AVT1YJR001W RPL29P05747 59 aaPredicted RBP2.63□□□□□ -1.99
AVT1YJR001W GIS2P53849 153 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99 RIP-Chip
AVT1YJR001W YHR212W-AP0CX91 67 aa2.62□□□□□ -1.99
AVT1YJR001W OLI1P61829 76 aa2.59□□□□□ -1.99
AVT1YJR001W DDR2P89113 61 aa2.58□□□□□ -2
AVT1YJR001W YHR086W-AQ3E746 53 aa2.58□□□□□ -2
AVT1YJR001W YJL127C-BQ3E828 52 aa2.56□□□□□ -2
AVT1YJR001W DYN1P36022 4092 aa2.54□□□□□ -2
AVT1YJR001W PMP3P87284 55 aa2.54□□□□□ -2
AVT1YJR001W RPC10P40422 70 aa2.52□□□□□ -2.01
AVT1YJR001W YCR108CQ3E819 63 aa2.52□□□□□ -2.01
AVT1YJR001W YGR146C-AQ8TGT9 53 aa2.5□□□□□ -2.01
AVT1YJR001W UTP20P35194 2493 aaKnown RBP2.5□□□□□ -2.01
AVT1YJR001W YBL044WP38194 122 aa2.49□□□□□ -2.01
AVT1YJR001W RPL37BP51402 88 aaKnown RBP2.49□□□□□ -2.01
AVT1YJR001W YBR016WP38216 128 aa2.44□□□□□ -2.02
AVT1YJR001W YLL066W-BQ8TGJ7 56 aa2.44□□□□□ -2.02
AVT1YJR001W YBR072C-AQ3E794 53 aa2.43□□□□□ -2.02
AVT1YJR001W HHY1P39982 102 aa2.41□□□□□ -2.02
AVT1YJR001W YOR316C-AQ3E806 69 aa2.4□□□□□ -2.03
AVT1YJR001W YHR073W-AP0C5N7 58 aa2.33□□□□□ -2.04
AVT1YJR001W YDR034C-AP0C289 58 aa2.32□□□□□ -2.04
AVT1YJR001W RPL37AP49166 88 aaKnown RBP2.24□□□□□ -2.05
AVT1YJR001W YOR072W-BQ3E832 53 aa2.22□□□□□ -2.05
AVT1YJR001W MDN1Q12019 4910 aaKnown RBP2.18□□□□□ -2.06
AVT1YJR001W YOL164W-AQ3E7A5 60 aa2.15□□□□□ -2.06
AVT1YJR001W YLR157W-EP0CF00 54 aa2.03□□□□□ -2.08
AVT1YJR001W Q0017Q9ZZX8 53 aa1.87□□□□□ -2.11
AVT1YJR001W YML054C-AQ3E809 52 aa1.85□□□□□ -2.11
AVT1YJR001W RPS29BP41058 56 aaKnown RBP1.73□□□□□ -2.13
AVT1YJR001W RPS29AP41057 56 aaKnown RBP1.73□□□□□ -2.13
AVT1YJR001W YHR050W-AQ05451 56 aa1.69□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 4.9 ms