RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W RPS28BP0C0X0 67 aaKnown RBP2.89□□□□□ -1.95
PRE3YJL001W RPS28AQ3E7X9 67 aaPredicted RBP2.89□□□□□ -1.95
PRE3YJL001W INO4P13902 151 aa2.88□□□□□ -1.95
PRE3YJL001W LIP1Q03579 150 aa2.87□□□□□ -1.95
PRE3YJL001W YSY6P38374 65 aa2.86□□□□□ -1.95
PRE3YJL001W YGR039WP53225 103 aa2.85□□□□□ -1.95
PRE3YJL001W YHR086W-AQ3E746 53 aa2.85□□□□□ -1.95
PRE3YJL001W YBR016WP38216 128 aa2.84□□□□□ -1.95
PRE3YJL001W YLR412C-AQ3E742 68 aa2.84□□□□□ -1.95
PRE3YJL001W YOL013W-AP0C272 63 aaPredicted RBP2.83□□□□□ -1.96
PRE3YJL001W SBH1P52870 82 aa2.83□□□□□ -1.96
PRE3YJL001W YFL041W-AQ3E817 63 aa2.82□□□□□ -1.96
PRE3YJL001W YLR255CO13574 117 aa2.8□□□□□ -1.96
PRE3YJL001W YGR146C-AQ8TGT9 53 aa2.8□□□□□ -1.96
PRE3YJL001W COX8P04039 78 aa2.79□□□□□ -1.96
PRE3YJL001W YIL102CP40488 101 aa2.79□□□□□ -1.96
PRE3YJL001W YKL065W-AQ2V2P2 73 aa2.77□□□□□ -1.97
PRE3YJL001W YOR314WQ12506 109 aa2.76□□□□□ -1.97
PRE3YJL001W NOP10Q6Q547 58 aaPredicted RBP2.76□□□□□ -1.97
PRE3YJL001W YML054C-AQ3E809 52 aa2.74□□□□□ -1.97
PRE3YJL001W YIL156W-BQ2V2P4 73 aa2.73□□□□□ -1.97
PRE3YJL001W RPS30AP0CX33 63 aaKnown RBP2.72□□□□□ -1.97
PRE3YJL001W RPS30BP0CX34 63 aaKnown RBP2.72□□□□□ -1.97
PRE3YJL001W OLI1P61829 76 aa2.72□□□□□ -1.97
PRE3YJL001W SLO1Q3E784 85 aa2.72□□□□□ -1.97
PRE3YJL001W YFL065CP43539 102 aa2.7□□□□□ -1.98
PRE3YJL001W YPR203WQ08994 102 aa2.7□□□□□ -1.98
PRE3YJL001W RPL37AP49166 88 aaKnown RBP2.69□□□□□ -1.98
PRE3YJL001W YBL044WP38194 122 aa2.68□□□□□ -1.98
PRE3YJL001W YOL166W-AQ8TGJ1 51 aa2.68□□□□□ -1.98
PRE3YJL001W YDR246W-AQ3E763 66 aa2.67□□□□□ -1.98
PRE3YJL001W YDR119W-AQ2V2P9 66 aa2.62□□□□□ -1.99
PRE3YJL001W YOR381W-AQ3E804 55 aa2.62□□□□□ -1.99
PRE3YJL001W AIM4P38305 123 aaPredicted RBP2.61□□□□□ -1.99
PRE3YJL001W MRX7P53869 86 aa2.61□□□□□ -1.99
PRE3YJL001W YPL038W-AQ3E7B4 63 aa2.61□□□□□ -1.99
PRE3YJL001W YBR201C-AQ2V2Q3 67 aa2.6□□□□□ -1.99
PRE3YJL001W YDR182W-AQ3E796 67 aa2.6□□□□□ -1.99
PRE3YJL001W SDH6Q3E785 79 aa2.57□□□□□ -2
PRE3YJL001W OST5Q92316 86 aa2.57□□□□□ -2
PRE3YJL001W RUB1Q03919 77 aa2.53□□□□□ -2
PRE3YJL001W YOR394C-AQ8TGJ0 55 aa2.49□□□□□ -2.01
PRE3YJL001W YMR001C-AQ8TGS9 76 aa2.49□□□□□ -2.01
PRE3YJL001W HUB1Q6Q546 73 aa2.47□□□□□ -2.01
PRE3YJL001W TOM6P33448 61 aa2.46□□□□□ -2.02
PRE3YJL001W ATP17Q06405 101 aa2.4□□□□□ -2.03
PRE3YJL001W YEL014CP39999 101 aa2.37□□□□□ -2.03
PRE3YJL001W YMR122CQ03879 124 aa2.34□□□□□ -2.03
PRE3YJL001W YER188C-AP0C0V2 99 aa2.32□□□□□ -2.04
PRE3YJL001W YNL277W-AQ3E7Z0 62 aa2.31□□□□□ -2.04
PRE3YJL001W YCR108CQ3E819 63 aa2.29□□□□□ -2.04
PRE3YJL001W SOM1Q05676 74 aa2.28□□□□□ -2.04
PRE3YJL001W YCR095W-AQ3E787 52 aa2.2□□□□□ -2.06
PRE3YJL001W YOR072W-BQ3E832 53 aa2.2□□□□□ -2.06
PRE3YJL001W QCR10P37299 77 aa2.19□□□□□ -2.06
PRE3YJL001W YIR021W-AQ3E739 70 aa2.13□□□□□ -2.07
PRE3YJL001W YGL014C-AP0C5N1 53 aa2.11□□□□□ -2.07
PRE3YJL001W YOR376W-AQ3E805 51 aa2.03□□□□□ -2.08
PRE3YJL001W HHY1P39982 102 aa2.01□□□□□ -2.09
PRE3YJL001W YBR072C-AQ3E794 53 aa1.86□□□□□ -2.11
PRE3YJL001W YHR050W-AQ05451 56 aa1.84□□□□□ -2.11
PRE3YJL001W YLR157W-EP0CF00 54 aa1.53□□□□□ -2.16
PRE3YJL001W YOL164W-AQ3E7A5 60 aa1.33□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 8.9 ms