RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YHR125WP38831 101 aa3.15□□□□□ -1.9
MSH1YHR120W YPR153WQ06537 140 aa3.15□□□□□ -1.9
MSH1YHR120W YBR027CP38220 110 aa3.14□□□□□ -1.91
MSH1YHR120W YDL012CQ12489 107 aa3.14□□□□□ -1.91
MSH1YHR120W YOR381W-AQ3E804 55 aa3.14□□□□□ -1.91
MSH1YHR120W SDH6Q3E785 79 aa3.14□□□□□ -1.91
MSH1YHR120W YGL149WP53116 101 aa3.13□□□□□ -1.91
MSH1YHR120W HUB1Q6Q546 73 aa3.13□□□□□ -1.91
MSH1YHR120W YMR122CQ03879 124 aa3.12□□□□□ -1.91
MSH1YHR120W YHR073W-AP0C5N7 58 aa3.11□□□□□ -1.91
MSH1YHR120W YOR268CQ08734 132 aa3.1□□□□□ -1.91
MSH1YHR120W YER188C-AP0C0V2 99 aa3.1□□□□□ -1.91
MSH1YHR120W YMR001C-AQ8TGS9 76 aa3.09□□□□□ -1.91
MSH1YHR120W OST5Q92316 86 aa3.08□□□□□ -1.92
MSH1YHR120W YNL277W-AQ3E7Z0 62 aa3.06□□□□□ -1.92
MSH1YHR120W YLR255CO13574 117 aa3.05□□□□□ -1.92
MSH1YHR120W YFR032C-BQ8TGU2 87 aa3.04□□□□□ -1.92
MSH1YHR120W YJR128WP47162 119 aa3.03□□□□□ -1.92
MSH1YHR120W YGR146C-AQ8TGT9 53 aa3.03□□□□□ -1.92
MSH1YHR120W YCR095W-AQ3E787 52 aa3□□□□□ -1.93
MSH1YHR120W YOR316C-AQ3E806 69 aa3□□□□□ -1.93
MSH1YHR120W ATP17Q06405 101 aa2.98□□□□□ -1.93
MSH1YHR120W YBL008W-AQ3E821 79 aa2.98□□□□□ -1.93
MSH1YHR120W COX8P04039 78 aa2.97□□□□□ -1.93
MSH1YHR120W CMC4Q3E7A9 73 aa2.97□□□□□ -1.93
MSH1YHR120W YBR201C-AQ2V2Q3 67 aa2.95□□□□□ -1.94
MSH1YHR120W YBR016WP38216 128 aa2.94□□□□□ -1.94
MSH1YHR120W COX7P10174 60 aa2.94□□□□□ -1.94
MSH1YHR120W YNL122CP53921 115 aaPredicted RBP2.94□□□□□ -1.94
MSH1YHR120W RPL37BP51402 88 aaKnown RBP2.92□□□□□ -1.94
MSH1YHR120W MRX7P53869 86 aa2.92□□□□□ -1.94
MSH1YHR120W YER175W-AQ8TGU4 54 aa2.92□□□□□ -1.94
MSH1YHR120W OLI1P61829 76 aa2.9□□□□□ -1.94
MSH1YHR120W YIL156W-BQ2V2P4 73 aa2.9□□□□□ -1.94
MSH1YHR120W YML100W-AQ8TGT0 57 aa2.88□□□□□ -1.95
MSH1YHR120W FYV12Q08559 129 aa2.86□□□□□ -1.95
MSH1YHR120W YJL144WP47009 104 aa2.85□□□□□ -1.95
MSH1YHR120W YOR376W-AQ3E805 51 aa2.81□□□□□ -1.96
MSH1YHR120W YGL034CP53186 121 aa2.8□□□□□ -1.96
MSH1YHR120W QCR10P37299 77 aa2.76□□□□□ -1.97
MSH1YHR120W YGL014C-AP0C5N1 53 aa2.75□□□□□ -1.97
MSH1YHR120W YEL014CP39999 101 aa2.72□□□□□ -1.97
MSH1YHR120W YOR394C-AQ8TGJ0 55 aa2.71□□□□□ -1.98
MSH1YHR120W YCR108CQ3E819 63 aa2.7□□□□□ -1.98
MSH1YHR120W Q0017Q9ZZX8 53 aa2.67□□□□□ -1.98
MSH1YHR120W YBL044WP38194 122 aa2.65□□□□□ -1.99
MSH1YHR120W RPL37AP49166 88 aaKnown RBP2.64□□□□□ -1.99
MSH1YHR120W SOM1Q05676 74 aa2.62□□□□□ -1.99
MSH1YHR120W YJL009WP47078 108 aa2.61□□□□□ -1.99
MSH1YHR120W YML054C-AQ3E809 52 aa2.61□□□□□ -1.99
MSH1YHR120W YDR210WQ03482 75 aa2.57□□□□□ -2
MSH1YHR120W YOR072W-BQ3E832 53 aa2.53□□□□□ -2
MSH1YHR120W YER078W-AQ3E7A2 54 aa2.49□□□□□ -2.01
MSH1YHR120W YBR072C-AQ3E794 53 aa2.48□□□□□ -2.01
MSH1YHR120W HHY1P39982 102 aa2.43□□□□□ -2.02
MSH1YHR120W YAL067W-AQ8TGK6 75 aa2.38□□□□□ -2.03
MSH1YHR120W RPS29BP41058 56 aaKnown RBP2.31□□□□□ -2.04
MSH1YHR120W RPS29AP41057 56 aaKnown RBP2.28□□□□□ -2.04
MSH1YHR120W YHR032W-AP0C5N6 59 aa2.27□□□□□ -2.05
MSH1YHR120W YHR050W-AQ05451 56 aa2.04□□□□□ -2.08
MSH1YHR120W YOL164W-AQ3E7A5 60 aa1.93□□□□□ -2.1
MSH1YHR120W YHR086W-AQ3E746 53 aa1.84□□□□□ -2.11
MSH1YHR120W YLR157W-EP0CF00 54 aa1.67□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 7.6 ms