RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YGL034CP53186 121 aa2.58□□□□□ -2
VPS29YHR012W YDL012CQ12489 107 aa2.58□□□□□ -2
VPS29YHR012W YLR361C-AQ3E795 98 aa2.57□□□□□ -2
VPS29YHR012W YJR128WP47162 119 aa2.56□□□□□ -2
VPS29YHR012W YGR164WP53291 111 aa2.55□□□□□ -2
VPS29YHR012W HHF1P02309 103 aaKnown RBP2.54□□□□□ -2
VPS29YHR012W RPS30AP0CX33 63 aaKnown RBP2.54□□□□□ -2
VPS29YHR012W RPS30BP0CX34 63 aaKnown RBP2.54□□□□□ -2
VPS29YHR012W YDR210WQ03482 75 aa2.54□□□□□ -2
VPS29YHR012W YHR125WP38831 101 aa2.53□□□□□ -2
VPS29YHR012W YJL009WP47078 108 aa2.52□□□□□ -2.01
VPS29YHR012W SDH6Q3E785 79 aa2.51□□□□□ -2.01
VPS29YHR012W YOR316C-AQ3E806 69 aa2.5□□□□□ -2.01
VPS29YHR012W YGR146C-AQ8TGT9 53 aa2.48□□□□□ -2.01
VPS29YHR012W YLR255CO13574 117 aa2.47□□□□□ -2.01
VPS29YHR012W YKL065W-AQ2V2P2 73 aa2.47□□□□□ -2.01
VPS29YHR012W YFR032C-BQ8TGU2 87 aa2.47□□□□□ -2.01
VPS29YHR012W COX8P04039 78 aa2.46□□□□□ -2.02
VPS29YHR012W SBH1P52870 82 aa2.46□□□□□ -2.02
VPS29YHR012W HUB1Q6Q546 73 aa2.46□□□□□ -2.02
VPS29YHR012W YMR001C-AQ8TGS9 76 aa2.46□□□□□ -2.02
VPS29YHR012W YER175W-AQ8TGU4 54 aa2.46□□□□□ -2.02
VPS29YHR012W OST5Q92316 86 aa2.45□□□□□ -2.02
VPS29YHR012W RPS29BP41058 56 aaKnown RBP2.44□□□□□ -2.02
VPS29YHR012W YOR381W-AQ3E804 55 aa2.44□□□□□ -2.02
VPS29YHR012W RPS29AP41057 56 aaKnown RBP2.43□□□□□ -2.02
VPS29YHR012W YJL144WP47009 104 aa2.43□□□□□ -2.02
VPS29YHR012W YMR122CQ03879 124 aa2.43□□□□□ -2.02
VPS29YHR012W YML054C-AQ3E809 52 aa2.42□□□□□ -2.02
VPS29YHR012W YBL008W-AQ3E821 79 aa2.42□□□□□ -2.02
VPS29YHR012W YBR016WP38216 128 aa2.41□□□□□ -2.02
VPS29YHR012W YBR201C-AQ2V2Q3 67 aa2.41□□□□□ -2.02
VPS29YHR012W OLI1P61829 76 aa2.4□□□□□ -2.03
VPS29YHR012W YER188C-AP0C0V2 99 aa2.39□□□□□ -2.03
VPS29YHR012W YIL156W-BQ2V2P4 73 aa2.39□□□□□ -2.03
VPS29YHR012W MRX7P53869 86 aa2.38□□□□□ -2.03
VPS29YHR012W YCR095W-AQ3E787 52 aa2.37□□□□□ -2.03
VPS29YHR012W YLR412C-AQ3E742 68 aa2.35□□□□□ -2.03
VPS29YHR012W ATP17Q06405 101 aa2.31□□□□□ -2.04
VPS29YHR012W YBR121C-AP0C5L4 52 aa2.29□□□□□ -2.04
VPS29YHR012W RPS28BP0C0X0 67 aaKnown RBP2.26□□□□□ -2.05
VPS29YHR012W YBL044WP38194 122 aa2.26□□□□□ -2.05
VPS29YHR012W RPS28AQ3E7X9 67 aaPredicted RBP2.26□□□□□ -2.05
VPS29YHR012W YNL277W-AQ3E7Z0 62 aa2.22□□□□□ -2.05
VPS29YHR012W YOR394C-AQ8TGJ0 55 aa2.22□□□□□ -2.05
VPS29YHR012W YEL014CP39999 101 aa2.19□□□□□ -2.06
VPS29YHR012W RPL37AP49166 88 aaKnown RBP2.19□□□□□ -2.06
VPS29YHR012W YCR108CQ3E819 63 aa2.19□□□□□ -2.06
VPS29YHR012W QCR10P37299 77 aa2.15□□□□□ -2.07
VPS29YHR012W YGL014C-AP0C5N1 53 aa2.12□□□□□ -2.07
VPS29YHR012W YML100W-AQ8TGT0 57 aa2.12□□□□□ -2.07
VPS29YHR012W YOR376W-AQ3E805 51 aa2.1□□□□□ -2.07
VPS29YHR012W YOR072W-BQ3E832 53 aa2.06□□□□□ -2.08
VPS29YHR012W SOM1Q05676 74 aa2.04□□□□□ -2.08
VPS29YHR012W HHY1P39982 102 aa1.98□□□□□ -2.09
VPS29YHR012W YBR072C-AQ3E794 53 aa1.94□□□□□ -2.1
VPS29YHR012W YER078W-AQ3E7A2 54 aa1.94□□□□□ -2.1
VPS29YHR012W YHR050W-AQ05451 56 aa1.67□□□□□ -2.14
VPS29YHR012W YAL067W-AQ8TGK6 75 aa1.56□□□□□ -2.16
VPS29YHR012W YOL164W-AQ3E7A5 60 aa1.51□□□□□ -2.17
VPS29YHR012W YLR157W-EP0CF00 54 aa1.38□□□□□ -2.19
VPS29YHR012W YHR032W-AP0C5N6 59 aa1.26□□□□□ -2.21
VPS29YHR012W YHR086W-AQ3E746 53 aa0.96□□□□□ -2.26
Retrieved 63 of 5,963 RNA–protein pairs in 71.2 ms