RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W YML100W-AQ8TGT0 57 aa1.89□□□□□ -2.11
ECM29YHL030W FMP27Q06179 2628 aa1.89□□□□□ -2.11
ECM29YHL030W YJR085CP47131 105 aaKnown RBP1.89□□□□□ -2.11
ECM29YHL030W YPR195CQ06594 109 aa1.88□□□□□ -2.11
ECM29YHL030W YGR146C-AQ8TGT9 53 aa1.88□□□□□ -2.11
ECM29YHL030W QCR10P37299 77 aa1.88□□□□□ -2.11
ECM29YHL030W YGL034CP53186 121 aa1.88□□□□□ -2.11
ECM29YHL030W YJR128WP47162 119 aa1.87□□□□□ -2.11
ECM29YHL030W GAT4P40569 121 aa1.87□□□□□ -2.11
ECM29YHL030W YDR246W-AQ3E763 66 aa1.86□□□□□ -2.11
ECM29YHL030W YFL067WP43537 175 aa1.86□□□□□ -2.11
ECM29YHL030W SOM1Q05676 74 aa1.86□□□□□ -2.11
ECM29YHL030W TOR1P35169 2470 aa1.86□□□□□ -2.11
ECM29YHL030W GIS2P53849 153 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
ECM29YHL030W LCL2Q08045 131 aa1.85□□□□□ -2.11
ECM29YHL030W UTP20P35194 2493 aaKnown RBP1.85□□□□□ -2.11
ECM29YHL030W YLL066W-BQ8TGJ7 56 aa1.85□□□□□ -2.11
ECM29YHL030W YGL014C-AP0C5N1 53 aa1.85□□□□□ -2.11
ECM29YHL030W YOR316C-AQ3E806 69 aa1.84□□□□□ -2.11
ECM29YHL030W YHR073W-AP0C5N7 58 aa1.84□□□□□ -2.12
ECM29YHL030W YBL008W-AQ3E821 79 aa1.83□□□□□ -2.12
ECM29YHL030W YJL009WP47078 108 aa1.82□□□□□ -2.12
ECM29YHL030W YML054C-AQ3E809 52 aa1.82□□□□□ -2.12
ECM29YHL030W CUP1-1P0CX80 61 aa1.81□□□□□ -2.12
ECM29YHL030W CUP1-2P0CX81 61 aa1.81□□□□□ -2.12
ECM29YHL030W FYV12Q08559 129 aa1.81□□□□□ -2.12
ECM29YHL030W YJL144WP47009 104 aa1.81□□□□□ -2.12
ECM29YHL030W YDL012CQ12489 107 aa1.8□□□□□ -2.12
ECM29YHL030W YOR072W-BQ3E832 53 aa1.8□□□□□ -2.12
ECM29YHL030W CMC4Q3E7A9 73 aa1.8□□□□□ -2.12
ECM29YHL030W YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
ECM29YHL030W YJL197C-AP0C5P0 93 aa1.76□□□□□ -2.13
ECM29YHL030W YLR255CO13574 117 aa1.75□□□□□ -2.13
ECM29YHL030W Q0017Q9ZZX8 53 aa1.75□□□□□ -2.13
ECM29YHL030W HHY1P39982 102 aa1.75□□□□□ -2.13
ECM29YHL030W RPL37BP51402 88 aaKnown RBP1.75□□□□□ -2.13
ECM29YHL030W YBR056W-AI2HB52 66 aa1.74□□□□□ -2.13
ECM29YHL030W YBR016WP38216 128 aa1.72□□□□□ -2.13
ECM29YHL030W YCR108CQ3E819 63 aa1.72□□□□□ -2.13
ECM29YHL030W YBR072C-AQ3E794 53 aa1.72□□□□□ -2.13
ECM29YHL030W GCN1P33892 2672 aaKnown RBP1.69□□□□□ -2.14
ECM29YHL030W NUM1Q00402 2748 aa1.66□□□□□ -2.14
ECM29YHL030W YER078W-AQ3E7A2 54 aa1.62□□□□□ -2.15
ECM29YHL030W RPL37AP49166 88 aaKnown RBP1.61□□□□□ -2.15
ECM29YHL030W YAL067W-AQ8TGK6 75 aa1.58□□□□□ -2.16
ECM29YHL030W TEL1P38110 2787 aa1.55□□□□□ -2.16
ECM29YHL030W YDR210WQ03482 75 aa1.53□□□□□ -2.16
ECM29YHL030W YER175W-AQ8TGU4 54 aa1.52□□□□□ -2.17
ECM29YHL030W YHR050W-AQ05451 56 aa1.48□□□□□ -2.17
ECM29YHL030W IRA1P18963 3092 aa1.48□□□□□ -2.17
ECM29YHL030W VPS13Q07878 3144 aa1.47□□□□□ -2.17
ECM29YHL030W TOM1Q03280 3268 aa1.46□□□□□ -2.18
ECM29YHL030W YOL164W-AQ3E7A5 60 aa1.46□□□□□ -2.18
ECM29YHL030W YHR032W-AP0C5N6 59 aa1.43□□□□□ -2.18
ECM29YHL030W IRA2P19158 3079 aa1.42□□□□□ -2.18
ECM29YHL030W YLR157W-EP0CF00 54 aa1.4□□□□□ -2.18
ECM29YHL030W RPS29BP41058 56 aaKnown RBP1.4□□□□□ -2.19
ECM29YHL030W CSF1Q12150 2958 aa1.36□□□□□ -2.19
ECM29YHL030W RPS29AP41057 56 aaKnown RBP1.34□□□□□ -2.19
ECM29YHL030W TRA1P38811 3744 aa1.31□□□□□ -2.2
ECM29YHL030W YHR086W-AQ3E746 53 aa1.14□□□□□ -2.23
ECM29YHL030W DYN1P36022 4092 aa1.1□□□□□ -2.23
ECM29YHL030W MDN1Q12019 4910 aaKnown RBP1.02□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 44.3 ms