RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C RPL43BP0CX26 92 aa1.54□□□□□ -2.16
MSM1YGR171C SIP18P50263 79 aa1.54□□□□□ -2.16
MSM1YGR171C RPL37AP49166 88 aaKnown RBP1.54□□□□□ -2.16
MSM1YGR171C HKR1P41809 1802 aa1.53□□□□□ -2.16
MSM1YGR171C URA2P07259 2214 aaKnown RBP1.52□□□□□ -2.17
MSM1YGR171C RPS27BP38711 82 aa1.52□□□□□ -2.17
MSM1YGR171C YJL133C-AQ3E7A3 74 aa1.51□□□□□ -2.17
MSM1YGR171C YCR108CQ3E819 63 aa1.5□□□□□ -2.17
MSM1YGR171C YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
MSM1YGR171C YBL044WP38194 122 aa1.49□□□□□ -2.17
MSM1YGR171C YLR307C-AQ3E825 87 aa1.47□□□□□ -2.17
MSM1YGR171C YBR016WP38216 128 aa1.46□□□□□ -2.18
MSM1YGR171C YGR146C-AQ8TGT9 53 aa1.46□□□□□ -2.18
MSM1YGR171C YLR157W-EP0CF00 54 aa1.45□□□□□ -2.18
MSM1YGR171C RPL37BP51402 88 aaKnown RBP1.45□□□□□ -2.18
MSM1YGR171C YGL258W-AQ3E740 77 aa1.45□□□□□ -2.18
MSM1YGR171C DDR2P89113 61 aa1.44□□□□□ -2.18
MSM1YGR171C FLO1P32768 1537 aa1.42□□□□□ -2.18
MSM1YGR171C RPL29P05747 59 aaPredicted RBP1.41□□□□□ -2.18
MSM1YGR171C YOL164W-AQ3E7A5 60 aa1.4□□□□□ -2.18
MSM1YGR171C YJL127C-BQ3E828 52 aa1.39□□□□□ -2.19
MSM1YGR171C SEN1Q00416 2231 aaKnown RBP1.37□□□□□ -2.19
MSM1YGR171C YOR316C-AQ3E806 69 aa1.35□□□□□ -2.19
MSM1YGR171C NCE101Q02820 53 aa1.3□□□□□ -2.2
MSM1YGR171C PMP3P87284 55 aa1.29□□□□□ -2.2
MSM1YGR171C YOR072W-BQ3E832 53 aa1.29□□□□□ -2.2
MSM1YGR171C RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
MSM1YGR171C YHR073W-AP0C5N7 58 aa1.26□□□□□ -2.21
MSM1YGR171C YDR524C-BQ3E6R4 66 aa1.26□□□□□ -2.21
MSM1YGR171C HOR7Q05827 59 aa1.25□□□□□ -2.21
MSM1YGR171C YDR034C-AP0C289 58 aa1.22□□□□□ -2.21
MSM1YGR171C PRP8P33334 2413 aaKnown RBP1.2□□□□□ -2.22
MSM1YGR171C TAO3P40468 2376 aa1.13□□□□□ -2.23
MSM1YGR171C YMR105W-AQ8TGS8 64 aa1.12□□□□□ -2.23
MSM1YGR171C RPL39P04650 51 aa1.06□□□□□ -2.24
MSM1YGR171C RPS29AP41057 56 aaKnown RBP1.03□□□□□ -2.24
MSM1YGR171C YML054C-AQ3E809 52 aa1□□□□□ -2.25
MSM1YGR171C YLL066W-BQ8TGJ7 56 aa0.99□□□□□ -2.25
MSM1YGR171C YPR117WQ06116 2489 aa0.99□□□□□ -2.25
MSM1YGR171C TOR1P35169 2470 aa0.98□□□□□ -2.25
MSM1YGR171C YHR050W-AQ05451 56 aa0.96□□□□□ -2.26
MSM1YGR171C MEC1P38111 2368 aa0.96□□□□□ -2.26
MSM1YGR171C Q0017Q9ZZX8 53 aa0.95□□□□□ -2.26
MSM1YGR171C NUM1Q00402 2748 aa0.95□□□□□ -2.26
MSM1YGR171C TOM1Q03280 3268 aa0.95□□□□□ -2.26
MSM1YGR171C TOR2P32600 2474 aaKnown RBP0.9□□□□□ -2.26
MSM1YGR171C YIL046W-AQ3E7Z4 54 aa0.9□□□□□ -2.27
MSM1YGR171C CUP1-1P0CX80 61 aa0.89□□□□□ -2.27
MSM1YGR171C CUP1-2P0CX81 61 aa0.89□□□□□ -2.27
MSM1YGR171C VPS13Q07878 3144 aa0.89□□□□□ -2.27
MSM1YGR171C UTP20P35194 2493 aaKnown RBP0.86□□□□□ -2.27
MSM1YGR171C GCN1P33892 2672 aaKnown RBP0.86□□□□□ -2.27
MSM1YGR171C TRA1P38811 3744 aa0.84□□□□□ -2.28
MSM1YGR171C FMP27Q06179 2628 aa0.82□□□□□ -2.28
MSM1YGR171C TEL1P38110 2787 aa0.8□□□□□ -2.28
MSM1YGR171C YDR034W-BQ6Q5X2 51 aa0.76□□□□□ -2.29
MSM1YGR171C IRA1P18963 3092 aa0.76□□□□□ -2.29
MSM1YGR171C IRA2P19158 3079 aa0.74□□□□□ -2.29
MSM1YGR171C MDN1Q12019 4910 aaKnown RBP0.74□□□□□ -2.29
MSM1YGR171C CSF1Q12150 2958 aa0.73□□□□□ -2.29
MSM1YGR171C DYN1P36022 4092 aa0.72□□□□□ -2.29
MSM1YGR171C Q0297Q9ZZV8 51 aa0.61□□□□□ -2.31
MSM1YGR171C YBR056W-AI2HB52 66 aa0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 46.1 ms