RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YIR021W-AQ3E739 70 aa3.14□□□□□ -1.91
MSP1YGR028W YSY6P38374 65 aa3.12□□□□□ -1.91
MSP1YGR028W LIP1Q03579 150 aa3.1□□□□□ -1.91
MSP1YGR028W TOM6P33448 61 aa3.09□□□□□ -1.91
MSP1YGR028W YIL102CP40488 101 aa3.09□□□□□ -1.91
MSP1YGR028W YPL038W-AQ3E7B4 63 aa3.09□□□□□ -1.91
MSP1YGR028W YOL013W-AP0C272 63 aaPredicted RBP3.08□□□□□ -1.92
MSP1YGR028W YBR016WP38216 128 aa3.07□□□□□ -1.92
MSP1YGR028W YDR119W-AQ2V2P9 66 aa3.07□□□□□ -1.92
MSP1YGR028W YBL008W-AQ3E821 79 aa3.07□□□□□ -1.92
MSP1YGR028W COX8P04039 78 aa3.06□□□□□ -1.92
MSP1YGR028W YGR146C-AQ8TGT9 53 aa3.05□□□□□ -1.92
MSP1YGR028W YLR255CO13574 117 aa3.04□□□□□ -1.92
MSP1YGR028W YKL065W-AQ2V2P2 73 aa3.04□□□□□ -1.92
MSP1YGR028W RPS30AP0CX33 63 aaKnown RBP3.03□□□□□ -1.92
MSP1YGR028W RPS30BP0CX34 63 aaKnown RBP3.03□□□□□ -1.92
MSP1YGR028W YOR314WQ12506 109 aa3.03□□□□□ -1.92
MSP1YGR028W AIM4P38305 123 aaPredicted RBP3.02□□□□□ -1.93
MSP1YGR028W YIL156W-BQ2V2P4 73 aa3.02□□□□□ -1.93
MSP1YGR028W SBH1P52870 82 aa3.01□□□□□ -1.93
MSP1YGR028W NOP10Q6Q547 58 aaPredicted RBP3□□□□□ -1.93
MSP1YGR028W OLI1P61829 76 aa2.99□□□□□ -1.93
MSP1YGR028W YBL044WP38194 122 aa2.98□□□□□ -1.93
MSP1YGR028W YML054C-AQ3E809 52 aa2.98□□□□□ -1.93
MSP1YGR028W RPS29BP41058 56 aaKnown RBP2.95□□□□□ -1.94
MSP1YGR028W RPS29AP41057 56 aaKnown RBP2.94□□□□□ -1.94
MSP1YGR028W YDR182W-AQ3E796 67 aa2.94□□□□□ -1.94
MSP1YGR028W YHR125WP38831 101 aa2.93□□□□□ -1.94
MSP1YGR028W YFR032C-BQ8TGU2 87 aa2.91□□□□□ -1.94
MSP1YGR028W YOR381W-AQ3E804 55 aa2.89□□□□□ -1.95
MSP1YGR028W YOL166W-AQ8TGJ1 51 aa2.89□□□□□ -1.95
MSP1YGR028W YLR412C-AQ3E742 68 aa2.88□□□□□ -1.95
MSP1YGR028W YDR246W-AQ3E763 66 aa2.88□□□□□ -1.95
MSP1YGR028W RPS28BP0C0X0 67 aaKnown RBP2.87□□□□□ -1.95
MSP1YGR028W RPS28AQ3E7X9 67 aaPredicted RBP2.87□□□□□ -1.95
MSP1YGR028W HUB1Q6Q546 73 aa2.87□□□□□ -1.95
MSP1YGR028W SDH6Q3E785 79 aa2.86□□□□□ -1.95
MSP1YGR028W YBR201C-AQ2V2Q3 67 aa2.85□□□□□ -1.95
MSP1YGR028W MRX7P53869 86 aa2.84□□□□□ -1.95
MSP1YGR028W OST5Q92316 86 aa2.83□□□□□ -1.96
MSP1YGR028W RPL37AP49166 88 aaKnown RBP2.82□□□□□ -1.96
MSP1YGR028W YMR122CQ03879 124 aa2.82□□□□□ -1.96
MSP1YGR028W YCR095W-AQ3E787 52 aa2.81□□□□□ -1.96
MSP1YGR028W YNL277W-AQ3E7Z0 62 aa2.81□□□□□ -1.96
MSP1YGR028W YMR001C-AQ8TGS9 76 aa2.8□□□□□ -1.96
MSP1YGR028W YER188C-AP0C0V2 99 aa2.77□□□□□ -1.97
MSP1YGR028W YOR394C-AQ8TGJ0 55 aa2.73□□□□□ -1.97
MSP1YGR028W YHR032W-AP0C5N6 59 aa2.72□□□□□ -1.97
MSP1YGR028W ATP17Q06405 101 aa2.68□□□□□ -1.98
MSP1YGR028W YML100W-AQ8TGT0 57 aa2.68□□□□□ -1.98
MSP1YGR028W YOR376W-AQ3E805 51 aa2.64□□□□□ -1.99
MSP1YGR028W YEL014CP39999 101 aa2.58□□□□□ -2
MSP1YGR028W QCR10P37299 77 aa2.54□□□□□ -2
MSP1YGR028W YGL014C-AP0C5N1 53 aa2.53□□□□□ -2
MSP1YGR028W YCR108CQ3E819 63 aa2.5□□□□□ -2.01
MSP1YGR028W SOM1Q05676 74 aa2.45□□□□□ -2.02
MSP1YGR028W YHR086W-AQ3E746 53 aa2.45□□□□□ -2.02
MSP1YGR028W YOR072W-BQ3E832 53 aa2.39□□□□□ -2.03
MSP1YGR028W YBR072C-AQ3E794 53 aa2.31□□□□□ -2.04
MSP1YGR028W HHY1P39982 102 aa2.3□□□□□ -2.04
MSP1YGR028W YHR050W-AQ05451 56 aa2.02□□□□□ -2.09
MSP1YGR028W YOL164W-AQ3E7A5 60 aa1.88□□□□□ -2.11
MSP1YGR028W YLR157W-EP0CF00 54 aa1.71□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 7.3 ms