RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W YNL122CP53921 115 aaPredicted RBP3.17□□□□□ -1.9
SHE10YGL228W LIP1Q03579 150 aa3.17□□□□□ -1.9
SHE10YGL228W YBL008W-AQ3E821 79 aa3.17□□□□□ -1.9
SHE10YGL228W CMC4Q3E7A9 73 aa3.15□□□□□ -1.91
SHE10YGL228W YOR316C-AQ3E806 69 aa3.14□□□□□ -1.91
SHE10YGL228W YOL166W-AQ8TGJ1 51 aa3.14□□□□□ -1.91
SHE10YGL228W AIM4P38305 123 aaPredicted RBP3.13□□□□□ -1.91
SHE10YGL228W YJR128WP47162 119 aa3.13□□□□□ -1.91
SHE10YGL228W YGR164WP53291 111 aa3.13□□□□□ -1.91
SHE10YGL228W YFR032C-BQ8TGU2 87 aa3.13□□□□□ -1.91
SHE10YGL228W HHF1P02309 103 aaKnown RBP3.11□□□□□ -1.91
SHE10YGL228W YML100W-AQ8TGT0 57 aa3.1□□□□□ -1.91
SHE10YGL228W TOM6P33448 61 aa3.09□□□□□ -1.91
SHE10YGL228W YJL144WP47009 104 aa3.09□□□□□ -1.91
SHE10YGL228W RPL37BP51402 88 aaKnown RBP3.08□□□□□ -1.92
SHE10YGL228W YDR182W-AQ3E796 67 aa3.08□□□□□ -1.92
SHE10YGL228W YHR125WP38831 101 aa3.07□□□□□ -1.92
SHE10YGL228W YLR255CO13574 117 aa3.05□□□□□ -1.92
SHE10YGL228W YGR146C-AQ8TGT9 53 aa3.05□□□□□ -1.92
SHE10YGL228W RPS30AP0CX33 63 aaKnown RBP3.04□□□□□ -1.92
SHE10YGL228W RPS30BP0CX34 63 aaKnown RBP3.04□□□□□ -1.92
SHE10YGL228W YKL065W-AQ2V2P2 73 aa3.02□□□□□ -1.93
SHE10YGL228W FYV12Q08559 129 aa3.02□□□□□ -1.93
SHE10YGL228W COX8P04039 78 aa3.01□□□□□ -1.93
SHE10YGL228W YBR016WP38216 128 aa3.01□□□□□ -1.93
SHE10YGL228W YOR376W-AQ3E805 51 aa3.01□□□□□ -1.93
SHE10YGL228W SDH6Q3E785 79 aa2.98□□□□□ -1.93
SHE10YGL228W OLI1P61829 76 aa2.95□□□□□ -1.94
SHE10YGL228W YMR001C-AQ8TGS9 76 aa2.93□□□□□ -1.94
SHE10YGL228W YIL156W-BQ2V2P4 73 aa2.93□□□□□ -1.94
SHE10YGL228W OST5Q92316 86 aa2.92□□□□□ -1.94
SHE10YGL228W Q0017Q9ZZX8 53 aa2.92□□□□□ -1.94
SHE10YGL228W YBR201C-AQ2V2Q3 67 aa2.91□□□□□ -1.94
SHE10YGL228W YJL009WP47078 108 aa2.9□□□□□ -1.94
SHE10YGL228W QCR10P37299 77 aa2.9□□□□□ -1.95
SHE10YGL228W SOM1Q05676 74 aa2.9□□□□□ -1.95
SHE10YGL228W HUB1Q6Q546 73 aa2.88□□□□□ -1.95
SHE10YGL228W MRX7P53869 86 aa2.88□□□□□ -1.95
SHE10YGL228W YOR381W-AQ3E804 55 aa2.87□□□□□ -1.95
SHE10YGL228W YHR032W-AP0C5N6 59 aa2.85□□□□□ -1.95
SHE10YGL228W YAL067W-AQ8TGK6 75 aa2.85□□□□□ -1.95
SHE10YGL228W YER078W-AQ3E7A2 54 aa2.84□□□□□ -1.96
SHE10YGL228W YMR122CQ03879 124 aa2.82□□□□□ -1.96
SHE10YGL228W YDR210WQ03482 75 aa2.81□□□□□ -1.96
SHE10YGL228W YBL044WP38194 122 aa2.8□□□□□ -1.96
SHE10YGL228W YER188C-AP0C0V2 99 aa2.75□□□□□ -1.97
SHE10YGL228W YCR095W-AQ3E787 52 aa2.74□□□□□ -1.97
SHE10YGL228W YML054C-AQ3E809 52 aa2.73□□□□□ -1.97
SHE10YGL228W YOR394C-AQ8TGJ0 55 aa2.71□□□□□ -1.98
SHE10YGL228W YEL014CP39999 101 aa2.7□□□□□ -1.98
SHE10YGL228W ATP17Q06405 101 aa2.69□□□□□ -1.98
SHE10YGL228W YCR108CQ3E819 63 aa2.64□□□□□ -1.99
SHE10YGL228W RPL37AP49166 88 aaKnown RBP2.59□□□□□ -1.99
SHE10YGL228W YGL014C-AP0C5N1 53 aa2.57□□□□□ -2
SHE10YGL228W YOR072W-BQ3E832 53 aa2.45□□□□□ -2.02
SHE10YGL228W RPS29BP41058 56 aaKnown RBP2.39□□□□□ -2.03
SHE10YGL228W HHY1P39982 102 aa2.34□□□□□ -2.03
SHE10YGL228W RPS29AP41057 56 aaKnown RBP2.31□□□□□ -2.04
SHE10YGL228W YHR086W-AQ3E746 53 aa2.26□□□□□ -2.05
SHE10YGL228W YBR072C-AQ3E794 53 aa2.23□□□□□ -2.05
SHE10YGL228W YHR050W-AQ05451 56 aa2□□□□□ -2.09
SHE10YGL228W YOL164W-AQ3E7A5 60 aa1.79□□□□□ -2.12
SHE10YGL228W YLR157W-EP0CF00 54 aa1.77□□□□□ -2.13
Retrieved 63 of 5,963 RNA–protein pairs in 23.9 ms