RNA–Protein interactions for RNA: YGL008C

PMA1, Transcript of Plasma membrane P2-type H+-ATPase, yeastyeast

Gene PMA1, Length 2,757 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMA1YGL008C YJL133C-AQ3E7A3 74 aa3.19□□□□□ -1.9
PMA1YGL008C RPL43AP0CX25 92 aaKnown RBP3.19□□□□□ -1.9
PMA1YGL008C RPL43BP0CX26 92 aa3.19□□□□□ -1.9
PMA1YGL008C YGR035W-AQ45U48 73 aa3.19□□□□□ -1.9
PMA1YGL008C YBR230W-AQ3E762 66 aa3.18□□□□□ -1.9
PMA1YGL008C YCL042WP25572 119 aa3.18□□□□□ -1.9
PMA1YGL008C BSC4P53841 131 aa3.17□□□□□ -1.9
PMA1YGL008C RPL29P05747 59 aaPredicted RBP3.17□□□□□ -1.9
PMA1YGL008C Q0297Q9ZZV8 51 aa3.16□□□□□ -1.9
PMA1YGL008C YBL039W-BP0C268 59 aa3.15□□□□□ -1.9
PMA1YGL008C YDR182W-AQ3E796 67 aa3.15□□□□□ -1.9
PMA1YGL008C Q0032Q9ZZX7 96 aa3.14□□□□□ -1.91
PMA1YGL008C RPC10P40422 70 aa3.14□□□□□ -1.91
PMA1YGL008C YGL041C-BQ3E750 60 aa3.14□□□□□ -1.91
PMA1YGL008C YDL012CQ12489 107 aa3.13□□□□□ -1.91
PMA1YGL008C YGR240C-AQ3E786 66 aa3.13□□□□□ -1.91
PMA1YGL008C YOL013W-AP0C272 63 aaPredicted RBP3.12□□□□□ -1.91
PMA1YGL008C YLR157W-DP0CE99 70 aa3.11□□□□□ -1.91
PMA1YGL008C LCL1Q02786 101 aa3.1□□□□□ -1.91
PMA1YGL008C YNL042W-BQ3E7Z2 85 aa3.1□□□□□ -1.91
PMA1YGL008C YKL065W-AQ2V2P2 73 aa3.1□□□□□ -1.91
PMA1YGL008C GIS2P53849 153 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
PMA1YGL008C YHR086W-AQ3E746 53 aa3.09□□□□□ -1.92
PMA1YGL008C YLR307C-AQ3E825 87 aa3.09□□□□□ -1.92
PMA1YGL008C YAR064WP39563 99 aa3.08□□□□□ -1.92
PMA1YGL008C DDR2P89113 61 aa3.08□□□□□ -1.92
PMA1YGL008C AUA1P32450 94 aa3.07□□□□□ -1.92
PMA1YGL008C YOR072WQ08486 104 aa3.07□□□□□ -1.92
PMA1YGL008C YMR001C-AQ8TGS9 76 aa3.07□□□□□ -1.92
PMA1YGL008C SGF11Q03067 99 aa3.06□□□□□ -1.92
PMA1YGL008C YLL066W-BQ8TGJ7 56 aa3.06□□□□□ -1.92
PMA1YGL008C SDH6Q3E785 79 aa3.06□□□□□ -1.92
PMA1YGL008C YNL122CP53921 115 aaPredicted RBP3.03□□□□□ -1.92
PMA1YGL008C YBR201C-AQ2V2Q3 67 aa3.03□□□□□ -1.92
PMA1YGL008C HUB1Q6Q546 73 aa3.01□□□□□ -1.93
PMA1YGL008C DYN1P36022 4092 aa3□□□□□ -1.93
PMA1YGL008C YJR128WP47162 119 aa2.97□□□□□ -1.93
PMA1YGL008C ATP17Q06405 101 aa2.92□□□□□ -1.94
PMA1YGL008C YDR034C-AP0C289 58 aa2.91□□□□□ -1.94
PMA1YGL008C YOL097W-AQ3E7Y9 61 aa2.86□□□□□ -1.95
PMA1YGL008C YGR146C-AQ8TGT9 53 aa2.86□□□□□ -1.95
PMA1YGL008C YJL009WP47078 108 aa2.85□□□□□ -1.95
PMA1YGL008C YOR316C-AQ3E806 69 aa2.85□□□□□ -1.95
PMA1YGL008C OLI1P61829 76 aa2.79□□□□□ -1.96
PMA1YGL008C HHY1P39982 102 aa2.78□□□□□ -1.96
PMA1YGL008C YCR108CQ3E819 63 aa2.77□□□□□ -1.97
PMA1YGL008C YHR073W-AP0C5N7 58 aa2.76□□□□□ -1.97
PMA1YGL008C YBL044WP38194 122 aa2.76□□□□□ -1.97
PMA1YGL008C YBR016WP38216 128 aa2.75□□□□□ -1.97
PMA1YGL008C COX7P10174 60 aa2.73□□□□□ -1.97
PMA1YGL008C RPL37BP51402 88 aaKnown RBP2.73□□□□□ -1.97
PMA1YGL008C MDN1Q12019 4910 aaKnown RBP2.68□□□□□ -1.98
PMA1YGL008C YOR394C-AQ8TGJ0 55 aa2.66□□□□□ -1.98
PMA1YGL008C YBR072C-AQ3E794 53 aa2.55□□□□□ -2
PMA1YGL008C RPL37AP49166 88 aaKnown RBP2.47□□□□□ -2.01
PMA1YGL008C YOL164W-AQ3E7A5 60 aa2.46□□□□□ -2.02
PMA1YGL008C YOR072W-BQ3E832 53 aa2.4□□□□□ -2.03
PMA1YGL008C YLR157W-EP0CF00 54 aa2.39□□□□□ -2.03
PMA1YGL008C YML054C-AQ3E809 52 aa2.28□□□□□ -2.04
PMA1YGL008C Q0017Q9ZZX8 53 aa2.24□□□□□ -2.05
PMA1YGL008C YHR050W-AQ05451 56 aa1.87□□□□□ -2.11
PMA1YGL008C RPS29BP41058 56 aaKnown RBP1.78□□□□□ -2.12
PMA1YGL008C RPS29AP41057 56 aaKnown RBP1.67□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 16.6 ms