RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W YOL097W-AQ3E7Y9 61 aa3.76□□□□□ -1.81
RPN11YFR004W YPR153WQ06537 140 aa3.75□□□□□ -1.81
RPN11YFR004W YDL012CQ12489 107 aa3.75□□□□□ -1.81
RPN11YFR004W YNL277W-AQ3E7Z0 62 aa3.74□□□□□ -1.81
RPN11YFR004W KSH1Q8TGJ3 72 aa3.74□□□□□ -1.81
RPN11YFR004W DDR48P18899 430 aaKnown RBP3.73□□□□□ -1.81
RPN11YFR004W YGL149WP53116 101 aa3.73□□□□□ -1.81
RPN11YFR004W YAL067W-AQ8TGK6 75 aa3.71□□□□□ -1.82
RPN11YFR004W YDR010CQ12426 110 aa3.7□□□□□ -1.82
RPN11YFR004W YHR125WP38831 101 aa3.69□□□□□ -1.82
RPN11YFR004W YOR381W-AQ3E804 55 aa3.68□□□□□ -1.82
RPN11YFR004W SDH6Q3E785 79 aa3.67□□□□□ -1.82
RPN11YFR004W YJR128WP47162 119 aa3.66□□□□□ -1.82
RPN11YFR004W YBL008W-AQ3E821 79 aa3.66□□□□□ -1.82
RPN11YFR004W YHR073W-AP0C5N7 58 aa3.63□□□□□ -1.83
RPN11YFR004W YMR122CQ03879 124 aa3.62□□□□□ -1.83
RPN11YFR004W YMR001C-AQ8TGS9 76 aa3.62□□□□□ -1.83
RPN11YFR004W YFR032C-BQ8TGU2 87 aa3.61□□□□□ -1.83
RPN11YFR004W YOR316C-AQ3E806 69 aa3.6□□□□□ -1.83
RPN11YFR004W YKL065W-AQ2V2P2 73 aa3.58□□□□□ -1.84
RPN11YFR004W HUB1Q6Q546 73 aa3.58□□□□□ -1.84
RPN11YFR004W YGR146C-AQ8TGT9 53 aa3.57□□□□□ -1.84
RPN11YFR004W OST5Q92316 86 aa3.57□□□□□ -1.84
RPN11YFR004W YER188C-AP0C0V2 99 aa3.56□□□□□ -1.84
RPN11YFR004W YLR255CO13574 117 aa3.55□□□□□ -1.84
RPN11YFR004W COX8P04039 78 aa3.54□□□□□ -1.84
RPN11YFR004W COX7P10174 60 aa3.53□□□□□ -1.84
RPN11YFR004W YJL144WP47009 104 aa3.53□□□□□ -1.84
RPN11YFR004W YCR095W-AQ3E787 52 aa3.53□□□□□ -1.84
RPN11YFR004W YBR201C-AQ2V2Q3 67 aa3.52□□□□□ -1.85
RPN11YFR004W YNL122CP53921 115 aaPredicted RBP3.51□□□□□ -1.85
RPN11YFR004W OLI1P61829 76 aa3.48□□□□□ -1.85
RPN11YFR004W YML100W-AQ8TGT0 57 aa3.47□□□□□ -1.85
RPN11YFR004W YBR016WP38216 128 aa3.46□□□□□ -1.86
RPN11YFR004W YOR376W-AQ3E805 51 aa3.46□□□□□ -1.86
RPN11YFR004W CMC4Q3E7A9 73 aa3.45□□□□□ -1.86
RPN11YFR004W YIL156W-BQ2V2P4 73 aa3.44□□□□□ -1.86
RPN11YFR004W MRX7P53869 86 aa3.42□□□□□ -1.86
RPN11YFR004W ATP17Q06405 101 aa3.42□□□□□ -1.86
RPN11YFR004W FYV12Q08559 129 aa3.42□□□□□ -1.86
RPN11YFR004W RPL37BP51402 88 aaKnown RBP3.4□□□□□ -1.87
RPN11YFR004W YHR032W-AP0C5N6 59 aa3.37□□□□□ -1.87
RPN11YFR004W QCR10P37299 77 aa3.28□□□□□ -1.88
RPN11YFR004W YEL014CP39999 101 aa3.26□□□□□ -1.89
RPN11YFR004W YBL044WP38194 122 aa3.22□□□□□ -1.89
RPN11YFR004W SOM1Q05676 74 aa3.22□□□□□ -1.89
RPN11YFR004W YCR108CQ3E819 63 aa3.22□□□□□ -1.89
RPN11YFR004W YOR394C-AQ8TGJ0 55 aa3.22□□□□□ -1.89
RPN11YFR004W YGL014C-AP0C5N1 53 aa3.19□□□□□ -1.9
RPN11YFR004W YJL009WP47078 108 aa3.18□□□□□ -1.9
RPN11YFR004W Q0017Q9ZZX8 53 aa3.17□□□□□ -1.9
RPN11YFR004W YML054C-AQ3E809 52 aa3.09□□□□□ -1.91
RPN11YFR004W RPL37AP49166 88 aaKnown RBP3.07□□□□□ -1.92
RPN11YFR004W YDR210WQ03482 75 aa3.01□□□□□ -1.93
RPN11YFR004W YOR072W-BQ3E832 53 aa2.97□□□□□ -1.93
RPN11YFR004W HHY1P39982 102 aa2.91□□□□□ -1.94
RPN11YFR004W YHR086W-AQ3E746 53 aa2.86□□□□□ -1.95
RPN11YFR004W YBR072C-AQ3E794 53 aa2.81□□□□□ -1.96
RPN11YFR004W RPS29AP41057 56 aaKnown RBP2.8□□□□□ -1.96
RPN11YFR004W RPS29BP41058 56 aaKnown RBP2.76□□□□□ -1.97
RPN11YFR004W YHR050W-AQ05451 56 aa2.39□□□□□ -2.03
RPN11YFR004W YOL164W-AQ3E7A5 60 aa2.33□□□□□ -2.04
RPN11YFR004W YLR157W-EP0CF00 54 aa2.03□□□□□ -2.08
Retrieved 63 of 5,963 RNA–protein pairs in 48.3 ms