RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W EDC1P53080 175 aaPredicted RBP2.56□□□□□ -2
LCP5YER127W YPR153WQ06537 140 aa2.55□□□□□ -2
LCP5YER127W YOR316C-AQ3E806 69 aa2.55□□□□□ -2
LCP5YER127W PBI2P0CT04 75 aaKnown RBP2.54□□□□□ -2
LCP5YER127W RPS29AP41057 56 aaKnown RBP2.52□□□□□ -2.01
LCP5YER127W RPS29BP41058 56 aaKnown RBP2.52□□□□□ -2.01
LCP5YER127W INO4P13902 151 aa2.51□□□□□ -2.01
LCP5YER127W YML054C-AQ3E809 52 aa2.51□□□□□ -2.01
LCP5YER127W YCR085WP25650 117 aa2.5□□□□□ -2.01
LCP5YER127W YLR255CO13574 117 aa2.49□□□□□ -2.01
LCP5YER127W YNL198CP40166 100 aa2.49□□□□□ -2.01
LCP5YER127W YBR016WP38216 128 aa2.46□□□□□ -2.02
LCP5YER127W RPA12P32529 125 aaKnown RBP2.45□□□□□ -2.02
LCP5YER127W YGR039WP53225 103 aa2.43□□□□□ -2.02
LCP5YER127W YFL041W-AQ3E817 63 aa2.43□□□□□ -2.02
LCP5YER127W YEL014CP39999 101 aa2.41□□□□□ -2.02
LCP5YER127W YIL156W-BQ2V2P4 73 aa2.4□□□□□ -2.03
LCP5YER127W YLR285C-AQ3E771 56 aa2.4□□□□□ -2.03
LCP5YER127W YGR146C-AQ8TGT9 53 aa2.4□□□□□ -2.03
LCP5YER127W YSY6P38374 65 aa2.39□□□□□ -2.03
LCP5YER127W YOL013W-AP0C272 63 aaPredicted RBP2.37□□□□□ -2.03
LCP5YER127W ATX1P38636 73 aa2.37□□□□□ -2.03
LCP5YER127W OLI1P61829 76 aa2.36□□□□□ -2.03
LCP5YER127W YKL065W-AQ2V2P2 73 aa2.36□□□□□ -2.03
LCP5YER127W YIL102CP40488 101 aa2.33□□□□□ -2.04
LCP5YER127W YOR314WQ12506 109 aa2.33□□□□□ -2.04
LCP5YER127W RPS30AP0CX33 63 aaKnown RBP2.32□□□□□ -2.04
LCP5YER127W RPS30BP0CX34 63 aaKnown RBP2.32□□□□□ -2.04
LCP5YER127W YBL044WP38194 122 aa2.31□□□□□ -2.04
LCP5YER127W AIM4P38305 123 aaPredicted RBP2.29□□□□□ -2.04
LCP5YER127W MRX7P53869 86 aa2.28□□□□□ -2.04
LCP5YER127W YBR201C-AQ2V2Q3 67 aa2.23□□□□□ -2.05
LCP5YER127W NOP10Q6Q547 58 aaPredicted RBP2.23□□□□□ -2.05
LCP5YER127W YER188C-AP0C0V2 99 aa2.22□□□□□ -2.05
LCP5YER127W OST5Q92316 86 aa2.22□□□□□ -2.05
LCP5YER127W YDR182W-AQ3E796 67 aa2.18□□□□□ -2.06
LCP5YER127W SDH6Q3E785 79 aa2.17□□□□□ -2.06
LCP5YER127W SLO1Q3E784 85 aa2.14□□□□□ -2.07
LCP5YER127W YOR394C-AQ8TGJ0 55 aa2.14□□□□□ -2.07
LCP5YER127W YOL166W-AQ8TGJ1 51 aa2.14□□□□□ -2.07
LCP5YER127W YPL038W-AQ3E7B4 63 aa2.11□□□□□ -2.07
LCP5YER127W SOM1Q05676 74 aa2.09□□□□□ -2.07
LCP5YER127W HUB1Q6Q546 73 aa2.09□□□□□ -2.07
LCP5YER127W YMR001C-AQ8TGS9 76 aa2.09□□□□□ -2.07
LCP5YER127W YDR246W-AQ3E763 66 aa2.06□□□□□ -2.08
LCP5YER127W RUB1Q03919 77 aa2.05□□□□□ -2.08
LCP5YER127W ATP17Q06405 101 aa2.05□□□□□ -2.08
LCP5YER127W YGL014C-AP0C5N1 53 aa2.03□□□□□ -2.08
LCP5YER127W YDR119W-AQ2V2P9 66 aa2.02□□□□□ -2.09
LCP5YER127W YIR021W-AQ3E739 70 aa2.02□□□□□ -2.09
LCP5YER127W HHY1P39982 102 aa2□□□□□ -2.09
LCP5YER127W YNL277W-AQ3E7Z0 62 aa2□□□□□ -2.09
LCP5YER127W TOM6P33448 61 aa1.99□□□□□ -2.09
LCP5YER127W QCR10P37299 77 aa1.98□□□□□ -2.09
LCP5YER127W YMR122CQ03879 124 aa1.98□□□□□ -2.09
LCP5YER127W YOR072W-BQ3E832 53 aa1.96□□□□□ -2.1
LCP5YER127W YCR108CQ3E819 63 aa1.87□□□□□ -2.11
LCP5YER127W YCR095W-AQ3E787 52 aa1.81□□□□□ -2.12
LCP5YER127W YOR376W-AQ3E805 51 aa1.75□□□□□ -2.13
LCP5YER127W YHR050W-AQ05451 56 aa1.68□□□□□ -2.14
LCP5YER127W YBR072C-AQ3E794 53 aa1.65□□□□□ -2.15
LCP5YER127W YLR157W-EP0CF00 54 aa1.56□□□□□ -2.16
LCP5YER127W YOL164W-AQ3E7A5 60 aa1.2□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 5.7 ms