RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W TDA2P40045 126 aa1.13□□□□□ -2.23
PRE1YER012W YBR016WP38216 128 aa1.12□□□□□ -2.23
PRE1YER012W GLC8P41818 229 aa1.12□□□□□ -2.23
PRE1YER012W YCR050CP25630 102 aa1.11□□□□□ -2.23
PRE1YER012W YLR255CO13574 117 aa1.1□□□□□ -2.23
PRE1YER012W INO4P13902 151 aa1.1□□□□□ -2.23
PRE1YER012W YOL013W-AP0C272 63 aaPredicted RBP1.09□□□□□ -2.23
PRE1YER012W RPS30AP0CX33 63 aaKnown RBP1.09□□□□□ -2.23
PRE1YER012W RPS30BP0CX34 63 aaKnown RBP1.09□□□□□ -2.23
PRE1YER012W YBL044WP38194 122 aa1.08□□□□□ -2.24
PRE1YER012W RPL37AP49166 88 aaKnown RBP1.08□□□□□ -2.24
PRE1YER012W YPR203WQ08994 102 aa1.08□□□□□ -2.24
PRE1YER012W RPS29AP41057 56 aaKnown RBP1.07□□□□□ -2.24
PRE1YER012W YGR039WP53225 103 aa1.07□□□□□ -2.24
PRE1YER012W YLR285C-AQ3E771 56 aa1.07□□□□□ -2.24
PRE1YER012W YGR146C-AQ8TGT9 53 aa1.07□□□□□ -2.24
PRE1YER012W YCR085WP25650 117 aa1.06□□□□□ -2.24
PRE1YER012W RPS29BP41058 56 aaKnown RBP1.06□□□□□ -2.24
PRE1YER012W YKL065W-AQ2V2P2 73 aa1.05□□□□□ -2.24
PRE1YER012W YDR246W-AQ3E763 66 aa1.05□□□□□ -2.24
PRE1YER012W NOP10Q6Q547 58 aaPredicted RBP1.05□□□□□ -2.24
PRE1YER012W YOR304C-AO14468 76 aa1.04□□□□□ -2.24
PRE1YER012W YEL014CP39999 101 aa1.04□□□□□ -2.24
PRE1YER012W YIL102CP40488 101 aa1.04□□□□□ -2.24
PRE1YER012W YOL166W-AQ8TGJ1 51 aa1.03□□□□□ -2.24
PRE1YER012W YIL156W-BQ2V2P4 73 aa1.02□□□□□ -2.25
PRE1YER012W YSY6P38374 65 aa1.01□□□□□ -2.25
PRE1YER012W ATX1P38636 73 aa1.01□□□□□ -2.25
PRE1YER012W OLI1P61829 76 aa1□□□□□ -2.25
PRE1YER012W YML054C-AQ3E809 52 aa0.99□□□□□ -2.25
PRE1YER012W YFL041W-AQ3E817 63 aa0.98□□□□□ -2.25
PRE1YER012W YOR314WQ12506 109 aa0.97□□□□□ -2.25
PRE1YER012W YDR119W-AQ2V2P9 66 aa0.96□□□□□ -2.26
PRE1YER012W SOM1Q05676 74 aa0.94□□□□□ -2.26
PRE1YER012W MRX7P53869 86 aa0.93□□□□□ -2.26
PRE1YER012W YBR201C-AQ2V2Q3 67 aa0.93□□□□□ -2.26
PRE1YER012W AIM4P38305 123 aaPredicted RBP0.92□□□□□ -2.26
PRE1YER012W YOR394C-AQ8TGJ0 55 aa0.92□□□□□ -2.26
PRE1YER012W SLO1Q3E784 85 aa0.91□□□□□ -2.26
PRE1YER012W YNL277W-AQ3E7Z0 62 aa0.91□□□□□ -2.26
PRE1YER012W YGL014C-AP0C5N1 53 aa0.9□□□□□ -2.27
PRE1YER012W QCR10P37299 77 aa0.9□□□□□ -2.27
PRE1YER012W YPL038W-AQ3E7B4 63 aa0.9□□□□□ -2.27
PRE1YER012W YMR122CQ03879 124 aa0.89□□□□□ -2.27
PRE1YER012W SDH6Q3E785 79 aa0.89□□□□□ -2.27
PRE1YER012W OST5Q92316 86 aa0.89□□□□□ -2.27
PRE1YER012W YER188C-AP0C0V2 99 aa0.88□□□□□ -2.27
PRE1YER012W YDR182W-AQ3E796 67 aa0.88□□□□□ -2.27
PRE1YER012W YMR001C-AQ8TGS9 76 aa0.87□□□□□ -2.27
PRE1YER012W YCR108CQ3E819 63 aa0.86□□□□□ -2.27
PRE1YER012W HHY1P39982 102 aa0.85□□□□□ -2.27
PRE1YER012W HUB1Q6Q546 73 aa0.85□□□□□ -2.27
PRE1YER012W ATP17Q06405 101 aa0.84□□□□□ -2.27
PRE1YER012W RUB1Q03919 77 aa0.81□□□□□ -2.28
PRE1YER012W TOM6P33448 61 aa0.78□□□□□ -2.28
PRE1YER012W YOR376W-AQ3E805 51 aa0.78□□□□□ -2.28
PRE1YER012W YIR021W-AQ3E739 70 aa0.73□□□□□ -2.29
PRE1YER012W YOR072W-BQ3E832 53 aa0.71□□□□□ -2.3
PRE1YER012W YLR157W-EP0CF00 54 aa0.7□□□□□ -2.3
PRE1YER012W YCR095W-AQ3E787 52 aa0.69□□□□□ -2.3
PRE1YER012W YHR050W-AQ05451 56 aa0.6□□□□□ -2.31
PRE1YER012W YBR072C-AQ3E794 53 aa0.6□□□□□ -2.31
PRE1YER012W YOL164W-AQ3E7A5 60 aa0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms