RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W HFA1P32874 2273 aa1.6□□□□□ -2.15
SPF1YEL031W YJR085CP47131 105 aaKnown RBP1.6□□□□□ -2.15
SPF1YEL031W LCL2Q08045 131 aa1.6□□□□□ -2.15
SPF1YEL031W YLL066W-BQ8TGJ7 56 aa1.6□□□□□ -2.15
SPF1YEL031W OLI1P61829 76 aa1.6□□□□□ -2.15
SPF1YEL031W YLR255CO13574 117 aa1.59□□□□□ -2.15
SPF1YEL031W GIS2P53849 153 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SPF1YEL031W YDL012CQ12489 107 aa1.59□□□□□ -2.15
SPF1YEL031W YOR316C-AQ3E806 69 aa1.58□□□□□ -2.16
SPF1YEL031W CSF1Q12150 2958 aa1.58□□□□□ -2.16
SPF1YEL031W YJR128WP47162 119 aa1.57□□□□□ -2.16
SPF1YEL031W RPL37BP51402 88 aaKnown RBP1.56□□□□□ -2.16
SPF1YEL031W YEL014CP39999 101 aa1.55□□□□□ -2.16
SPF1YEL031W YDR034C-AP0C289 58 aa1.55□□□□□ -2.16
SPF1YEL031W COX7P10174 60 aa1.54□□□□□ -2.16
SPF1YEL031W YOR394C-AQ8TGJ0 55 aa1.54□□□□□ -2.16
SPF1YEL031W YMR230W-AQ3E7B5 62 aa1.54□□□□□ -2.16
SPF1YEL031W LCL1Q02786 101 aa1.53□□□□□ -2.16
SPF1YEL031W FYV12Q08559 129 aa1.53□□□□□ -2.16
SPF1YEL031W YBR016WP38216 128 aa1.52□□□□□ -2.17
SPF1YEL031W URA2P07259 2214 aaKnown RBP1.52□□□□□ -2.17
SPF1YEL031W IRA2P19158 3079 aa1.51□□□□□ -2.17
SPF1YEL031W IRA1P18963 3092 aa1.5□□□□□ -2.17
SPF1YEL031W YBL044WP38194 122 aa1.49□□□□□ -2.17
SPF1YEL031W RPL43AP0CX25 92 aaKnown RBP1.49□□□□□ -2.17
SPF1YEL031W RPL43BP0CX26 92 aa1.49□□□□□ -2.17
SPF1YEL031W YDR210WQ03482 75 aa1.48□□□□□ -2.17
SPF1YEL031W YBR072C-AQ3E794 53 aa1.47□□□□□ -2.17
SPF1YEL031W YOR072W-BQ3E832 53 aa1.46□□□□□ -2.18
SPF1YEL031W YCL042WP25572 119 aa1.46□□□□□ -2.18
SPF1YEL031W YCR108CQ3E819 63 aa1.46□□□□□ -2.18
SPF1YEL031W YBR056W-AI2HB52 66 aa1.45□□□□□ -2.18
SPF1YEL031W FMP27Q06179 2628 aa1.45□□□□□ -2.18
SPF1YEL031W TEL1P38110 2787 aa1.45□□□□□ -2.18
SPF1YEL031W YJL009WP47078 108 aa1.43□□□□□ -2.18
SPF1YEL031W YER078W-AQ3E7A2 54 aa1.43□□□□□ -2.18
SPF1YEL031W YML054C-AQ3E809 52 aa1.43□□□□□ -2.18
SPF1YEL031W YJL144WP47009 104 aa1.43□□□□□ -2.18
SPF1YEL031W YPR117WQ06116 2489 aa1.43□□□□□ -2.18
SPF1YEL031W RPL37AP49166 88 aaKnown RBP1.42□□□□□ -2.18
SPF1YEL031W YPR195CQ06594 109 aa1.42□□□□□ -2.18
SPF1YEL031W GCN1P33892 2672 aaKnown RBP1.41□□□□□ -2.18
SPF1YEL031W CMC4Q3E7A9 73 aa1.4□□□□□ -2.18
SPF1YEL031W HHY1P39982 102 aa1.4□□□□□ -2.19
SPF1YEL031W Q0017Q9ZZX8 53 aa1.39□□□□□ -2.19
SPF1YEL031W YFL067WP43537 175 aa1.39□□□□□ -2.19
SPF1YEL031W PRP8P33334 2413 aaKnown RBP1.38□□□□□ -2.19
SPF1YEL031W YHR032W-AP0C5N6 59 aa1.36□□□□□ -2.19
SPF1YEL031W TOR2P32600 2474 aaKnown RBP1.36□□□□□ -2.19
SPF1YEL031W MDN1Q12019 4910 aaKnown RBP1.36□□□□□ -2.19
SPF1YEL031W CUP1-1P0CX80 61 aa1.35□□□□□ -2.19
SPF1YEL031W CUP1-2P0CX81 61 aa1.35□□□□□ -2.19
SPF1YEL031W UTP20P35194 2493 aaKnown RBP1.35□□□□□ -2.19
SPF1YEL031W MEC1P38111 2368 aa1.34□□□□□ -2.19
SPF1YEL031W YAL067W-AQ8TGK6 75 aa1.32□□□□□ -2.2
SPF1YEL031W TOR1P35169 2470 aa1.25□□□□□ -2.21
SPF1YEL031W NUM1Q00402 2748 aa1.22□□□□□ -2.21
SPF1YEL031W YHR050W-AQ05451 56 aa1.18□□□□□ -2.22
SPF1YEL031W YOL164W-AQ3E7A5 60 aa1.16□□□□□ -2.22
SPF1YEL031W RPS29AP41057 56 aaKnown RBP1.1□□□□□ -2.23
SPF1YEL031W YHR086W-AQ3E746 53 aa1.03□□□□□ -2.25
SPF1YEL031W YLR157W-EP0CF00 54 aa1.02□□□□□ -2.25
SPF1YEL031W RPS29BP41058 56 aaKnown RBP1.02□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 7.8 ms