RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C RPL37BP51402 88 aaKnown RBP6.07□□□□□ -1.44
VPS60YDR486C YDR182W-AQ3E796 67 aa6.03□□□□□ -1.44
VPS60YDR486C TOM6P33448 61 aa6.02□□□□□ -1.45
VPS60YDR486C YJL144WP47009 104 aa6.01□□□□□ -1.45
VPS60YDR486C YHR125WP38831 101 aa5.99□□□□□ -1.45
VPS60YDR486C YGR146C-AQ8TGT9 53 aa5.97□□□□□ -1.45
VPS60YDR486C YLR255CO13574 117 aa5.96□□□□□ -1.46
VPS60YDR486C COX8P04039 78 aa5.92□□□□□ -1.46
VPS60YDR486C YKL065W-AQ2V2P2 73 aa5.92□□□□□ -1.46
VPS60YDR486C RPS30AP0CX33 63 aaKnown RBP5.88□□□□□ -1.47
VPS60YDR486C RPS30BP0CX34 63 aaKnown RBP5.88□□□□□ -1.47
VPS60YDR486C YBR016WP38216 128 aa5.88□□□□□ -1.47
VPS60YDR486C YBL008W-AQ3E821 79 aa5.87□□□□□ -1.47
VPS60YDR486C YFR032C-BQ8TGU2 87 aa5.85□□□□□ -1.47
VPS60YDR486C SDH6Q3E785 79 aa5.83□□□□□ -1.48
VPS60YDR486C FYV12Q08559 129 aa5.82□□□□□ -1.48
VPS60YDR486C Q0017Q9ZZX8 53 aa5.82□□□□□ -1.48
VPS60YDR486C OLI1P61829 76 aa5.79□□□□□ -1.48
VPS60YDR486C YIL156W-BQ2V2P4 73 aa5.77□□□□□ -1.49
VPS60YDR486C OST5Q92316 86 aa5.73□□□□□ -1.49
VPS60YDR486C YJL009WP47078 108 aa5.72□□□□□ -1.49
VPS60YDR486C YMR001C-AQ8TGS9 76 aa5.71□□□□□ -1.5
VPS60YDR486C YBR201C-AQ2V2Q3 67 aa5.7□□□□□ -1.5
VPS60YDR486C YGL034CP53186 121 aa5.67□□□□□ -1.5
VPS60YDR486C MRX7P53869 86 aa5.65□□□□□ -1.5
VPS60YDR486C HUB1Q6Q546 73 aa5.62□□□□□ -1.51
VPS60YDR486C YDR210WQ03482 75 aa5.57□□□□□ -1.52
VPS60YDR486C YIR021W-AQ3E739 70 aa5.53□□□□□ -1.52
VPS60YDR486C YBL044WP38194 122 aa5.5□□□□□ -1.53
VPS60YDR486C YMR122CQ03879 124 aa5.48□□□□□ -1.53
VPS60YDR486C YOR381W-AQ3E804 55 aa5.47□□□□□ -1.53
VPS60YDR486C YML054C-AQ3E809 52 aa5.46□□□□□ -1.54
VPS60YDR486C YER188C-AP0C0V2 99 aa5.33□□□□□ -1.56
VPS60YDR486C YCR095W-AQ3E787 52 aa5.33□□□□□ -1.56
VPS60YDR486C YOR394C-AQ8TGJ0 55 aa5.33□□□□□ -1.56
VPS60YDR486C ATP17Q06405 101 aa5.28□□□□□ -1.56
VPS60YDR486C SBH1P52870 82 aa5.26□□□□□ -1.57
VPS60YDR486C YCR108CQ3E819 63 aa5.13□□□□□ -1.59
VPS60YDR486C RPL37AP49166 88 aaKnown RBP5.08□□□□□ -1.6
VPS60YDR486C YEL014CP39999 101 aa5.07□□□□□ -1.6
VPS60YDR486C YLR412C-AQ3E742 68 aa4.96□□□□□ -1.62
VPS60YDR486C QCR10P37299 77 aa4.87□□□□□ -1.63
VPS60YDR486C YOR072W-BQ3E832 53 aa4.85□□□□□ -1.63
VPS60YDR486C RPS29BP41058 56 aaKnown RBP4.81□□□□□ -1.64
VPS60YDR486C YGL014C-AP0C5N1 53 aa4.71□□□□□ -1.66
VPS60YDR486C RPS29AP41057 56 aaKnown RBP4.66□□□□□ -1.66
VPS60YDR486C YBR121C-AP0C5L4 52 aa4.62□□□□□ -1.67
VPS60YDR486C YNL277W-AQ3E7Z0 62 aa4.59□□□□□ -1.67
VPS60YDR486C HHY1P39982 102 aa4.58□□□□□ -1.68
VPS60YDR486C SOM1Q05676 74 aa4.55□□□□□ -1.68
VPS60YDR486C RPS28BP0C0X0 67 aaKnown RBP4.54□□□□□ -1.68
VPS60YDR486C RPS28AQ3E7X9 67 aaPredicted RBP4.54□□□□□ -1.68
VPS60YDR486C YML100W-AQ8TGT0 57 aa4.42□□□□□ -1.7
VPS60YDR486C YBR072C-AQ3E794 53 aa4.41□□□□□ -1.7
VPS60YDR486C YOR376W-AQ3E805 51 aa4.38□□□□□ -1.71
VPS60YDR486C YER175W-AQ8TGU4 54 aa4.06□□□□□ -1.76
VPS60YDR486C YHR050W-AQ05451 56 aa3.97□□□□□ -1.77
VPS60YDR486C YAL067W-AQ8TGK6 75 aa3.55□□□□□ -1.84
VPS60YDR486C YOL164W-AQ3E7A5 60 aa3.32□□□□□ -1.88
VPS60YDR486C YER078W-AQ3E7A2 54 aa3.2□□□□□ -1.9
VPS60YDR486C YLR157W-EP0CF00 54 aa3.16□□□□□ -1.9
VPS60YDR486C YHR032W-AP0C5N6 59 aa3.02□□□□□ -1.93
VPS60YDR486C YHR086W-AQ3E746 53 aa2.41□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 8.5 ms