RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W YMR103CQ04436 120 aa0.65□□□□□ -2.31
SSF2YDR312W YBR072C-AQ3E794 53 aa0.64□□□□□ -2.31
SSF2YDR312W SRB6P32570 121 aa0.63□□□□□ -2.31
SSF2YDR312W VMA21P41806 77 aa0.63□□□□□ -2.31
SSF2YDR312W YGR164WP53291 111 aa0.63□□□□□ -2.31
SSF2YDR312W YML054C-AQ3E809 52 aa0.63□□□□□ -2.31
SSF2YDR312W PAU23Q07987 124 aa0.62□□□□□ -2.31
SSF2YDR312W YIR021W-AQ3E739 70 aa0.62□□□□□ -2.31
SSF2YDR312W MIC10Q96VH5 97 aa0.62□□□□□ -2.31
SSF2YDR312W YOR304C-AO14468 76 aa0.61□□□□□ -2.31
SSF2YDR312W RSM19P53733 91 aaPredicted RBP0.61□□□□□ -2.31
SSF2YDR312W LSM6Q06406 86 aaKnown RBP0.61□□□□□ -2.31
SSF2YDR312W YLR255CO13574 117 aa0.6□□□□□ -2.31
SSF2YDR312W VMA9Q3E7B6 73 aa0.6□□□□□ -2.31
SSF2YDR312W YOR316C-AQ3E806 69 aa0.59□□□□□ -2.31
SSF2YDR312W NHP2P32495 156 aaPredicted RBP0.58□□□□□ -2.32
SSF2YDR312W HUR1P45820 110 aa0.58□□□□□ -2.32
SSF2YDR312W YJL133C-AQ3E7A3 74 aa0.58□□□□□ -2.32
SSF2YDR312W YOL164W-AQ3E7A5 60 aa0.58□□□□□ -2.32
SSF2YDR312W YBL044WP38194 122 aa0.57□□□□□ -2.32
SSF2YDR312W RUB1Q03919 77 aa0.57□□□□□ -2.32
SSF2YDR312W YPL038W-AQ3E7B4 63 aa0.55□□□□□ -2.32
SSF2YDR312W YFR009W-AP0C5M9 85 aa0.53□□□□□ -2.32
SSF2YDR312W YJR107C-AP0CT86 78 aa0.51□□□□□ -2.33
SSF2YDR312W ATX1P38636 73 aa0.51□□□□□ -2.33
SSF2YDR312W RPS30AP0CX33 63 aaKnown RBP0.5□□□□□ -2.33
SSF2YDR312W RPS30BP0CX34 63 aaKnown RBP0.5□□□□□ -2.33
SSF2YDR312W ATP18P81450 59 aa0.5□□□□□ -2.33
SSF2YDR312W YIL156W-BQ2V2P4 73 aa0.49□□□□□ -2.33
SSF2YDR312W YCR095W-AQ3E787 52 aa0.49□□□□□ -2.33
SSF2YDR312W RPA12P32529 125 aaKnown RBP0.48□□□□□ -2.33
SSF2YDR312W MRX7P53869 86 aa0.47□□□□□ -2.33
SSF2YDR312W ZEO1Q08245 113 aa0.47□□□□□ -2.33
SSF2YDR312W MSL1P40567 111 aaPredicted RBP0.46□□□□□ -2.34
SSF2YDR312W YGR146C-AQ8TGT9 53 aa0.46□□□□□ -2.34
SSF2YDR312W YDR381C-AQ3E6R5 114 aa0.45□□□□□ -2.34
SSF2YDR312W RPL38P49167 78 aaKnown RBP0.45□□□□□ -2.34
SSF2YDR312W OLI1P61829 76 aa0.44□□□□□ -2.34
SSF2YDR312W YKL065W-AQ2V2P2 73 aa0.44□□□□□ -2.34
SSF2YDR312W SSS1P35179 80 aa0.43□□□□□ -2.34
SSF2YDR312W YNL198CP40166 100 aa0.43□□□□□ -2.34
SSF2YDR312W PAI3P01094 68 aa0.39□□□□□ -2.35
SSF2YDR312W YIL134C-AQ45U18 67 aa0.39□□□□□ -2.35
SSF2YDR312W YOR394C-AQ8TGJ0 55 aa0.38□□□□□ -2.35
SSF2YDR312W YOR072W-BQ3E832 53 aa0.35□□□□□ -2.35
SSF2YDR312W YCR085WP25650 117 aa0.32□□□□□ -2.36
SSF2YDR312W YBR201C-AQ2V2Q3 67 aa0.32□□□□□ -2.36
SSF2YDR312W YHR050W-AQ05451 56 aa0.3□□□□□ -2.36
SSF2YDR312W YIL102C-AQ2V2P5 75 aa0.29□□□□□ -2.36
SSF2YDR312W YFL041W-AQ3E817 63 aa0.29□□□□□ -2.36
SSF2YDR312W TOM6P33448 61 aa0.28□□□□□ -2.36
SSF2YDR312W ATP17Q06405 101 aa0.28□□□□□ -2.36
SSF2YDR312W YDR119W-AQ2V2P9 66 aa0.25□□□□□ -2.37
SSF2YDR312W NOP10Q6Q547 58 aaPredicted RBP0.25□□□□□ -2.37
SSF2YDR312W YOR314WQ12506 109 aa0.24□□□□□ -2.37
SSF2YDR312W YSY6P38374 65 aa0.23□□□□□ -2.37
SSF2YDR312W SDH6Q3E785 79 aa0.23□□□□□ -2.37
SSF2YDR312W YCR108CQ3E819 63 aa0.22□□□□□ -2.37
SSF2YDR312W YOL166W-AQ8TGJ1 51 aa0.21□□□□□ -2.38
SSF2YDR312W HUB1Q6Q546 73 aa0.19□□□□□ -2.38
SSF2YDR312W YMR001C-AQ8TGS9 76 aa0.19□□□□□ -2.38
SSF2YDR312W YDR182W-AQ3E796 67 aa0.15□□□□□ -2.39
SSF2YDR312W YDR246W-AQ3E763 66 aa0.14□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 6.7 ms