RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YMR001C-AQ8TGS9 76 aa1.46□□□□□ -2.18
SSD1YDR293C YGR146C-AQ8TGT9 53 aa1.46□□□□□ -2.18
SSD1YDR293C COX8P04039 78 aa1.45□□□□□ -2.18
SSD1YDR293C YOR316C-AQ3E806 69 aa1.45□□□□□ -2.18
SSD1YDR293C YBL008W-AQ3E821 79 aa1.45□□□□□ -2.18
SSD1YDR293C YGL034CP53186 121 aa1.45□□□□□ -2.18
SSD1YDR293C YOL014WQ08110 124 aa1.45□□□□□ -2.18
SSD1YDR293C YFR032C-BQ8TGU2 87 aa1.45□□□□□ -2.18
SSD1YDR293C RPS30AP0CX33 63 aaKnown RBP1.45□□□□□ -2.18
SSD1YDR293C RPS30BP0CX34 63 aaKnown RBP1.45□□□□□ -2.18
SSD1YDR293C ATP17Q06405 101 aa1.45□□□□□ -2.18
SSD1YDR293C YBR201C-AQ2V2Q3 67 aa1.44□□□□□ -2.18
SSD1YDR293C YOR381W-AQ3E804 55 aa1.44□□□□□ -2.18
SSD1YDR293C OLI1P61829 76 aa1.43□□□□□ -2.18
SSD1YDR293C CMC4Q3E7A9 73 aa1.43□□□□□ -2.18
SSD1YDR293C Q0017Q9ZZX8 53 aa1.43□□□□□ -2.18
SSD1YDR293C PRP8P33334 2413 aaKnown RBP1.43□□□□□ -2.18
SSD1YDR293C YBR027CP38220 110 aa1.43□□□□□ -2.18
SSD1YDR293C MEC1P38111 2368 aa1.43□□□□□ -2.18
SSD1YDR293C YNL122CP53921 115 aaPredicted RBP1.43□□□□□ -2.18
SSD1YDR293C YER188C-AP0C0V2 99 aa1.42□□□□□ -2.18
SSD1YDR293C YGL149WP53116 101 aa1.42□□□□□ -2.18
SSD1YDR293C YMR122CQ03879 124 aa1.42□□□□□ -2.18
SSD1YDR293C YCR095W-AQ3E787 52 aa1.42□□□□□ -2.18
SSD1YDR293C YML054C-AQ3E809 52 aa1.42□□□□□ -2.18
SSD1YDR293C YIL156W-BQ2V2P4 73 aa1.41□□□□□ -2.18
SSD1YDR293C LCL2Q08045 131 aa1.41□□□□□ -2.18
SSD1YDR293C YDL012CQ12489 107 aa1.4□□□□□ -2.19
SSD1YDR293C RPL37BP51402 88 aaKnown RBP1.39□□□□□ -2.19
SSD1YDR293C QCR10P37299 77 aa1.38□□□□□ -2.19
SSD1YDR293C YPR195CQ06594 109 aa1.37□□□□□ -2.19
SSD1YDR293C FYV12Q08559 129 aa1.37□□□□□ -2.19
SSD1YDR293C YBR016WP38216 128 aa1.37□□□□□ -2.19
SSD1YDR293C YJL009WP47078 108 aa1.36□□□□□ -2.19
SSD1YDR293C YAL067W-AQ8TGK6 75 aa1.36□□□□□ -2.19
SSD1YDR293C YJR128WP47162 119 aa1.36□□□□□ -2.19
SSD1YDR293C UTP20P35194 2493 aaKnown RBP1.36□□□□□ -2.19
SSD1YDR293C YER078W-AQ3E7A2 54 aa1.35□□□□□ -2.19
SSD1YDR293C YHR032W-AP0C5N6 59 aa1.34□□□□□ -2.19
SSD1YDR293C YMR230W-AQ3E7B5 62 aa1.34□□□□□ -2.19
SSD1YDR293C YML100W-AQ8TGT0 57 aa1.34□□□□□ -2.2
SSD1YDR293C YDR010CQ12426 110 aa1.33□□□□□ -2.2
SSD1YDR293C YOR394C-AQ8TGJ0 55 aa1.32□□□□□ -2.2
SSD1YDR293C TEL1P38110 2787 aa1.32□□□□□ -2.2
SSD1YDR293C YOR072W-BQ3E832 53 aa1.32□□□□□ -2.2
SSD1YDR293C YBR072C-AQ3E794 53 aa1.3□□□□□ -2.2
SSD1YDR293C YGL014C-AP0C5N1 53 aa1.29□□□□□ -2.2
SSD1YDR293C YEL014CP39999 101 aa1.29□□□□□ -2.2
SSD1YDR293C RPL37AP49166 88 aaKnown RBP1.28□□□□□ -2.21
SSD1YDR293C SOM1Q05676 74 aa1.26□□□□□ -2.21
SSD1YDR293C YBL044WP38194 122 aa1.24□□□□□ -2.21
SSD1YDR293C YJL144WP47009 104 aa1.24□□□□□ -2.21
SSD1YDR293C YDR210WQ03482 75 aa1.24□□□□□ -2.21
SSD1YDR293C NUM1Q00402 2748 aa1.22□□□□□ -2.21
SSD1YDR293C YCR108CQ3E819 63 aa1.2□□□□□ -2.22
SSD1YDR293C HHY1P39982 102 aa1.18□□□□□ -2.22
SSD1YDR293C YOR376W-AQ3E805 51 aa1.17□□□□□ -2.22
SSD1YDR293C RPS29BP41058 56 aaKnown RBP1.14□□□□□ -2.23
SSD1YDR293C YHR086W-AQ3E746 53 aa1.11□□□□□ -2.23
SSD1YDR293C YHR050W-AQ05451 56 aa1.1□□□□□ -2.23
SSD1YDR293C RPS29AP41057 56 aaKnown RBP1.07□□□□□ -2.24
SSD1YDR293C YOL164W-AQ3E7A5 60 aa0.88□□□□□ -2.27
SSD1YDR293C YLR157W-EP0CF00 54 aa0.88□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 9 ms