RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YJL197C-AP0C5P0 93 aa2.75□□□□□ -1.97
NUP42YDR192C YAR064WP39563 99 aa2.75□□□□□ -1.97
NUP42YDR192C FYV12Q08559 129 aa2.75□□□□□ -1.97
NUP42YDR192C YDR119W-AQ2V2P9 66 aa2.75□□□□□ -1.97
NUP42YDR192C DDR48P18899 430 aaKnown RBP2.74□□□□□ -1.97
NUP42YDR192C AIM4P38305 123 aaPredicted RBP2.74□□□□□ -1.97
NUP42YDR192C YER187WP40102 141 aa2.74□□□□□ -1.97
NUP42YDR192C YOL013W-AP0C272 63 aaPredicted RBP2.72□□□□□ -1.97
NUP42YDR192C YHR073W-AP0C5N7 58 aa2.71□□□□□ -1.98
NUP42YDR192C YIL102CP40488 101 aa2.71□□□□□ -1.98
NUP42YDR192C YDR010CQ12426 110 aa2.71□□□□□ -1.98
NUP42YDR192C NOP10Q6Q547 58 aaPredicted RBP2.71□□□□□ -1.98
NUP42YDR192C LIP1Q03579 150 aa2.7□□□□□ -1.98
NUP42YDR192C CMC4Q3E7A9 73 aa2.7□□□□□ -1.98
NUP42YDR192C YPR153WQ06537 140 aa2.68□□□□□ -1.98
NUP42YDR192C HUB1Q6Q546 73 aa2.66□□□□□ -1.98
NUP42YDR192C SDH6Q3E785 79 aa2.65□□□□□ -1.99
NUP42YDR192C YNL122CP53921 115 aaPredicted RBP2.64□□□□□ -1.99
NUP42YDR192C YOL166W-AQ8TGJ1 51 aa2.64□□□□□ -1.99
NUP42YDR192C YDR246W-AQ3E763 66 aa2.63□□□□□ -1.99
NUP42YDR192C YOR376W-AQ3E805 51 aa2.63□□□□□ -1.99
NUP42YDR192C COX8P04039 78 aa2.62□□□□□ -1.99
NUP42YDR192C YGR146C-AQ8TGT9 53 aa2.62□□□□□ -1.99
NUP42YDR192C OST5Q92316 86 aa2.62□□□□□ -1.99
NUP42YDR192C QCR10P37299 77 aa2.61□□□□□ -1.99
NUP42YDR192C YHR086W-AQ3E746 53 aa2.61□□□□□ -1.99
NUP42YDR192C YOR381W-AQ3E804 55 aa2.61□□□□□ -1.99
NUP42YDR192C RPS30AP0CX33 63 aaKnown RBP2.6□□□□□ -1.99
NUP42YDR192C RPS30BP0CX34 63 aaKnown RBP2.6□□□□□ -1.99
NUP42YDR192C SOM1Q05676 74 aa2.6□□□□□ -1.99
NUP42YDR192C YKL065W-AQ2V2P2 73 aa2.6□□□□□ -1.99
NUP42YDR192C YOR316C-AQ3E806 69 aa2.6□□□□□ -1.99
NUP42YDR192C YMR001C-AQ8TGS9 76 aa2.58□□□□□ -2
NUP42YDR192C YJR128WP47162 119 aa2.57□□□□□ -2
NUP42YDR192C YIL156W-BQ2V2P4 73 aa2.57□□□□□ -2
NUP42YDR192C YLR255CO13574 117 aa2.56□□□□□ -2
NUP42YDR192C MRX7P53869 86 aa2.56□□□□□ -2
NUP42YDR192C OLI1P61829 76 aa2.56□□□□□ -2
NUP42YDR192C YBR201C-AQ2V2Q3 67 aa2.56□□□□□ -2
NUP42YDR192C Q0017Q9ZZX8 53 aa2.55□□□□□ -2
NUP42YDR192C YBR016WP38216 128 aa2.5□□□□□ -2.01
NUP42YDR192C YMR122CQ03879 124 aa2.49□□□□□ -2.01
NUP42YDR192C YML054C-AQ3E809 52 aa2.48□□□□□ -2.01
NUP42YDR192C YCR095W-AQ3E787 52 aa2.47□□□□□ -2.01
NUP42YDR192C RPL37BP51402 88 aaKnown RBP2.45□□□□□ -2.02
NUP42YDR192C YER188C-AP0C0V2 99 aa2.44□□□□□ -2.02
NUP42YDR192C YEL014CP39999 101 aa2.44□□□□□ -2.02
NUP42YDR192C ATP17Q06405 101 aa2.41□□□□□ -2.02
NUP42YDR192C YJL009WP47078 108 aa2.37□□□□□ -2.03
NUP42YDR192C YOR394C-AQ8TGJ0 55 aa2.37□□□□□ -2.03
NUP42YDR192C YBL044WP38194 122 aa2.34□□□□□ -2.03
NUP42YDR192C YDR210WQ03482 75 aa2.32□□□□□ -2.04
NUP42YDR192C YGL014C-AP0C5N1 53 aa2.29□□□□□ -2.04
NUP42YDR192C RPL37AP49166 88 aaKnown RBP2.25□□□□□ -2.05
NUP42YDR192C YOR072W-BQ3E832 53 aa2.25□□□□□ -2.05
NUP42YDR192C YCR108CQ3E819 63 aa2.24□□□□□ -2.05
NUP42YDR192C YBR072C-AQ3E794 53 aa2.14□□□□□ -2.07
NUP42YDR192C HHY1P39982 102 aa2.1□□□□□ -2.07
NUP42YDR192C RPS29BP41058 56 aaKnown RBP2.09□□□□□ -2.07
NUP42YDR192C RPS29AP41057 56 aaKnown RBP2□□□□□ -2.09
NUP42YDR192C YHR050W-AQ05451 56 aa1.86□□□□□ -2.11
NUP42YDR192C YLR157W-EP0CF00 54 aa1.61□□□□□ -2.15
NUP42YDR192C YOL164W-AQ3E7A5 60 aa1.59□□□□□ -2.15
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms