RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W YOL097W-AQ3E7Y9 61 aa2.79□□□□□ -1.96
SSB1YDL229W RPL43AP0CX25 92 aaKnown RBP2.77□□□□□ -1.97
SSB1YDL229W RPL43BP0CX26 92 aa2.77□□□□□ -1.97
SSB1YDL229W YBR230W-AQ3E762 66 aa2.77□□□□□ -1.97
SSB1YDL229W YOR011W-AQ3E807 68 aa2.77□□□□□ -1.97
SSB1YDL229W TRA1P38811 3744 aa2.76□□□□□ -1.97
SSB1YDL229W YLR122CQ12312 125 aa2.76□□□□□ -1.97
SSB1YDL229W YJL127C-BQ3E828 52 aa2.76□□□□□ -1.97
SSB1YDL229W YMR105W-AQ8TGS8 64 aa2.76□□□□□ -1.97
SSB1YDL229W YGR240C-AQ3E786 66 aa2.75□□□□□ -1.97
SSB1YDL229W YJR128WP47162 119 aa2.74□□□□□ -1.97
SSB1YDL229W PMP3P87284 55 aa2.74□□□□□ -1.97
SSB1YDL229W YFL067WP43537 175 aa2.72□□□□□ -1.97
SSB1YDL229W TAR1Q8TGM6 124 aa2.72□□□□□ -1.97
SSB1YDL229W PRP8P33334 2413 aaKnown RBP2.72□□□□□ -1.97
SSB1YDL229W DDR2P89113 61 aa2.72□□□□□ -1.97
SSB1YDL229W NUM1Q00402 2748 aa2.71□□□□□ -1.98
SSB1YDL229W RPL39P04650 51 aa2.71□□□□□ -1.98
SSB1YDL229W GIS2P53849 153 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SSB1YDL229W YLR307C-AQ3E825 87 aa2.71□□□□□ -1.98
SSB1YDL229W YOR394C-AQ8TGJ0 55 aa2.71□□□□□ -1.98
SSB1YDL229W YJL144WP47009 104 aa2.7□□□□□ -1.98
SSB1YDL229W MEC1P38111 2368 aa2.7□□□□□ -1.98
SSB1YDL229W YBR056W-AI2HB52 66 aa2.69□□□□□ -1.98
SSB1YDL229W LCL1Q02786 101 aa2.68□□□□□ -1.98
SSB1YDL229W YNL146C-AQ3E7Z1 64 aa2.68□□□□□ -1.98
SSB1YDL229W COX7P10174 60 aa2.67□□□□□ -1.98
SSB1YDL229W YHR007C-AQ07074 71 aa2.67□□□□□ -1.98
SSB1YDL229W YGL260WP53056 76 aa2.65□□□□□ -1.98
SSB1YDL229W YCR108CQ3E819 63 aa2.65□□□□□ -1.98
SSB1YDL229W CUP1-1P0CX80 61 aa2.63□□□□□ -1.99
SSB1YDL229W CUP1-2P0CX81 61 aa2.63□□□□□ -1.99
SSB1YDL229W YGR146C-AQ8TGT9 53 aa2.63□□□□□ -1.99
SSB1YDL229W YBL044WP38194 122 aa2.61□□□□□ -1.99
SSB1YDL229W YMR230W-AQ3E7B5 62 aa2.61□□□□□ -1.99
SSB1YDL229W RPC10P40422 70 aa2.6□□□□□ -1.99
SSB1YDL229W RPL37BP51402 88 aaKnown RBP2.6□□□□□ -1.99
SSB1YDL229W HOR7Q05827 59 aa2.59□□□□□ -1.99
SSB1YDL229W OLI1P61829 76 aa2.57□□□□□ -2
SSB1YDL229W RDS3Q06835 107 aaPredicted RBP2.54□□□□□ -2
SSB1YDL229W YBR016WP38216 128 aa2.52□□□□□ -2.01
SSB1YDL229W YJL009WP47078 108 aa2.49□□□□□ -2.01
SSB1YDL229W YOR316C-AQ3E806 69 aa2.49□□□□□ -2.01
SSB1YDL229W Q0297Q9ZZV8 51 aa2.49□□□□□ -2.01
SSB1YDL229W UTP20P35194 2493 aaKnown RBP2.46□□□□□ -2.02
SSB1YDL229W YHR073W-AP0C5N7 58 aa2.45□□□□□ -2.02
SSB1YDL229W YBR072C-AQ3E794 53 aa2.38□□□□□ -2.03
SSB1YDL229W DYN1P36022 4092 aa2.38□□□□□ -2.03
SSB1YDL229W HHY1P39982 102 aa2.38□□□□□ -2.03
SSB1YDL229W YLL066W-BQ8TGJ7 56 aa2.38□□□□□ -2.03
SSB1YDL229W RPL37AP49166 88 aaKnown RBP2.33□□□□□ -2.04
SSB1YDL229W YHR212W-AP0CX91 67 aa2.32□□□□□ -2.04
SSB1YDL229W YDR034C-AP0C289 58 aa2.3□□□□□ -2.04
SSB1YDL229W YOR072W-BQ3E832 53 aa2.26□□□□□ -2.05
SSB1YDL229W YHR086W-AQ3E746 53 aa2.25□□□□□ -2.05
SSB1YDL229W YOL164W-AQ3E7A5 60 aa2.21□□□□□ -2.06
SSB1YDL229W MDN1Q12019 4910 aaKnown RBP2.2□□□□□ -2.06
SSB1YDL229W YLR157W-EP0CF00 54 aa1.97□□□□□ -2.09
SSB1YDL229W YML054C-AQ3E809 52 aa1.9□□□□□ -2.11
SSB1YDL229W Q0017Q9ZZX8 53 aa1.82□□□□□ -2.12
SSB1YDL229W YHR050W-AQ05451 56 aa1.71□□□□□ -2.14
SSB1YDL229W RPS29AP41057 56 aaKnown RBP1.66□□□□□ -2.14
SSB1YDL229W RPS29BP41058 56 aaKnown RBP1.59□□□□□ -2.15
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms