RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W RPL43AP0CX25 92 aaKnown RBP2.9□□□□□ -1.94
SNF3YDL194W RPL43BP0CX26 92 aa2.9□□□□□ -1.94
SNF3YDL194W YJL133C-AQ3E7A3 74 aa2.9□□□□□ -1.95
SNF3YDL194W YGL258W-AQ3E740 77 aa2.89□□□□□ -1.95
SNF3YDL194W RPS27AP35997 82 aaKnown RBP2.89□□□□□ -1.95
SNF3YDL194W HFA1P32874 2273 aa2.89□□□□□ -1.95
SNF3YDL194W YLL006W-AQ3E814 58 aa2.88□□□□□ -1.95
SNF3YDL194W YHR086W-AQ3E746 53 aa2.87□□□□□ -1.95
SNF3YDL194W YHR212W-AP0CX91 67 aa2.86□□□□□ -1.95
SNF3YDL194W TAO3P40468 2376 aa2.86□□□□□ -1.95
SNF3YDL194W YAR064WP39563 99 aa2.85□□□□□ -1.95
SNF3YDL194W NCE101Q02820 53 aa2.84□□□□□ -1.95
SNF3YDL194W HHY1P39982 102 aa2.84□□□□□ -1.96
SNF3YDL194W RPS27BP38711 82 aa2.82□□□□□ -1.96
SNF3YDL194W YCR108CQ3E819 63 aa2.81□□□□□ -1.96
SNF3YDL194W YBR072C-AQ3E794 53 aa2.81□□□□□ -1.96
SNF3YDL194W YBL044WP38194 122 aa2.8□□□□□ -1.96
SNF3YDL194W YLR307C-AQ3E825 87 aa2.79□□□□□ -1.96
SNF3YDL194W DDR2P89113 61 aa2.75□□□□□ -1.97
SNF3YDL194W IRA2P19158 3079 aa2.73□□□□□ -1.97
SNF3YDL194W RPL29P05747 59 aaPredicted RBP2.73□□□□□ -1.97
SNF3YDL194W IRA1P18963 3092 aa2.73□□□□□ -1.97
SNF3YDL194W YIL046W-AQ3E7Z4 54 aa2.73□□□□□ -1.97
SNF3YDL194W YDR034W-BQ6Q5X2 51 aa2.73□□□□□ -1.97
SNF3YDL194W YJL127C-BQ3E828 52 aa2.72□□□□□ -1.97
SNF3YDL194W YGR146C-AQ8TGT9 53 aa2.72□□□□□ -1.97
SNF3YDL194W CSF1Q12150 2958 aa2.71□□□□□ -1.97
SNF3YDL194W YBR016WP38216 128 aa2.69□□□□□ -1.98
SNF3YDL194W RPL37BP51402 88 aaKnown RBP2.68□□□□□ -1.98
SNF3YDL194W FMP27Q06179 2628 aa2.67□□□□□ -1.98
SNF3YDL194W YPR117WQ06116 2489 aa2.67□□□□□ -1.98
SNF3YDL194W RPL39P04650 51 aa2.61□□□□□ -1.99
SNF3YDL194W YMR105W-AQ8TGS8 64 aa2.61□□□□□ -1.99
SNF3YDL194W PMP3P87284 55 aa2.6□□□□□ -1.99
SNF3YDL194W TRA1P38811 3744 aa2.59□□□□□ -2
SNF3YDL194W YOR316C-AQ3E806 69 aa2.56□□□□□ -2
SNF3YDL194W TOR2P32600 2474 aaKnown RBP2.56□□□□□ -2
SNF3YDL194W YOL164W-AQ3E7A5 60 aa2.54□□□□□ -2
SNF3YDL194W CUP1-1P0CX80 61 aa2.51□□□□□ -2.01
SNF3YDL194W CUP1-2P0CX81 61 aa2.51□□□□□ -2.01
SNF3YDL194W GCN1P33892 2672 aaKnown RBP2.5□□□□□ -2.01
SNF3YDL194W HOR7Q05827 59 aa2.47□□□□□ -2.01
SNF3YDL194W YBR056W-AI2HB52 66 aa2.44□□□□□ -2.02
SNF3YDL194W YOR072W-BQ3E832 53 aa2.44□□□□□ -2.02
SNF3YDL194W TEL1P38110 2787 aa2.43□□□□□ -2.02
SNF3YDL194W YHR073W-AP0C5N7 58 aa2.42□□□□□ -2.02
SNF3YDL194W RPL37AP49166 88 aaKnown RBP2.42□□□□□ -2.02
SNF3YDL194W YLR157W-EP0CF00 54 aa2.41□□□□□ -2.02
SNF3YDL194W PRP8P33334 2413 aaKnown RBP2.41□□□□□ -2.02
SNF3YDL194W Q0297Q9ZZV8 51 aa2.37□□□□□ -2.03
SNF3YDL194W MEC1P38111 2368 aa2.36□□□□□ -2.03
SNF3YDL194W YDR034C-AP0C289 58 aa2.35□□□□□ -2.03
SNF3YDL194W TOR1P35169 2470 aa2.28□□□□□ -2.04
SNF3YDL194W NUM1Q00402 2748 aa2.28□□□□□ -2.04
SNF3YDL194W UTP20P35194 2493 aaKnown RBP2.26□□□□□ -2.05
SNF3YDL194W YLL066W-BQ8TGJ7 56 aa2.22□□□□□ -2.05
SNF3YDL194W DYN1P36022 4092 aa2.07□□□□□ -2.08
SNF3YDL194W RPS29BP41058 56 aaKnown RBP2□□□□□ -2.09
SNF3YDL194W YML054C-AQ3E809 52 aa1.95□□□□□ -2.1
SNF3YDL194W RPS29AP41057 56 aaKnown RBP1.88□□□□□ -2.11
SNF3YDL194W Q0017Q9ZZX8 53 aa1.87□□□□□ -2.11
SNF3YDL194W YHR050W-AQ05451 56 aa1.83□□□□□ -2.12
SNF3YDL194W MDN1Q12019 4910 aaKnown RBP1.74□□□□□ -2.13
Retrieved 63 of 5,963 RNA–protein pairs in 4.2 ms