RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C YJL133C-AQ3E7A3 74 aa2.18□□□□□ -2.06
CDC9YDL164C YMR001C-AQ8TGS9 76 aa2.18□□□□□ -2.06
CDC9YDL164C Q0032Q9ZZX7 96 aa2.18□□□□□ -2.06
CDC9YDL164C TAO3P40468 2376 aa2.18□□□□□ -2.06
CDC9YDL164C YLR157W-DP0CE99 70 aa2.17□□□□□ -2.06
CDC9YDL164C SDH6Q3E785 79 aa2.17□□□□□ -2.06
CDC9YDL164C CSF1Q12150 2958 aa2.17□□□□□ -2.06
CDC9YDL164C YJR128WP47162 119 aa2.17□□□□□ -2.06
CDC9YDL164C AUA1P32450 94 aa2.16□□□□□ -2.06
CDC9YDL164C YBR230W-AQ3E762 66 aa2.16□□□□□ -2.06
CDC9YDL164C ATP17Q06405 101 aa2.15□□□□□ -2.06
CDC9YDL164C YJL127C-BQ3E828 52 aa2.15□□□□□ -2.06
CDC9YDL164C YBL039W-BP0C268 59 aa2.14□□□□□ -2.07
CDC9YDL164C RPC10P40422 70 aa2.13□□□□□ -2.07
CDC9YDL164C HOR7Q05827 59 aa2.13□□□□□ -2.07
CDC9YDL164C YLR307C-AQ3E825 87 aa2.13□□□□□ -2.07
CDC9YDL164C TRA1P38811 3744 aa2.11□□□□□ -2.07
CDC9YDL164C SGF11Q03067 99 aa2.1□□□□□ -2.07
CDC9YDL164C DDR2P89113 61 aa2.1□□□□□ -2.07
CDC9YDL164C YOR072WQ08486 104 aa2.09□□□□□ -2.07
CDC9YDL164C IRA1P18963 3092 aa2.07□□□□□ -2.08
CDC9YDL164C FMP27Q06179 2628 aa2.05□□□□□ -2.08
CDC9YDL164C GCN1P33892 2672 aaKnown RBP2.05□□□□□ -2.08
CDC9YDL164C PRP8P33334 2413 aaKnown RBP2.04□□□□□ -2.08
CDC9YDL164C YOL097W-AQ3E7Y9 61 aa2□□□□□ -2.09
CDC9YDL164C YLL066W-BQ8TGJ7 56 aa2□□□□□ -2.09
CDC9YDL164C YGR146C-AQ8TGT9 53 aa2□□□□□ -2.09
CDC9YDL164C UTP20P35194 2493 aaKnown RBP1.99□□□□□ -2.09
CDC9YDL164C YDR034W-BQ6Q5X2 51 aa1.99□□□□□ -2.09
CDC9YDL164C MEC1P38111 2368 aa1.98□□□□□ -2.09
CDC9YDL164C COX7P10174 60 aa1.97□□□□□ -2.09
CDC9YDL164C YPR117WQ06116 2489 aa1.97□□□□□ -2.09
CDC9YDL164C YHR073W-AP0C5N7 58 aa1.94□□□□□ -2.1
CDC9YDL164C RPL37BP51402 88 aaKnown RBP1.94□□□□□ -2.1
CDC9YDL164C RPL43AP0CX25 92 aaKnown RBP1.94□□□□□ -2.1
CDC9YDL164C RPL43BP0CX26 92 aa1.94□□□□□ -2.1
CDC9YDL164C YOR394C-AQ8TGJ0 55 aa1.93□□□□□ -2.1
CDC9YDL164C Q0297Q9ZZV8 51 aa1.93□□□□□ -2.1
CDC9YDL164C YOR316C-AQ3E806 69 aa1.93□□□□□ -2.1
CDC9YDL164C OLI1P61829 76 aa1.91□□□□□ -2.1
CDC9YDL164C YBR016WP38216 128 aa1.91□□□□□ -2.1
CDC9YDL164C YCR108CQ3E819 63 aa1.91□□□□□ -2.1
CDC9YDL164C YBR072C-AQ3E794 53 aa1.9□□□□□ -2.11
CDC9YDL164C RPL37AP49166 88 aaKnown RBP1.88□□□□□ -2.11
CDC9YDL164C YLR157W-EP0CF00 54 aa1.87□□□□□ -2.11
CDC9YDL164C YBL044WP38194 122 aa1.87□□□□□ -2.11
CDC9YDL164C YOL164W-AQ3E7A5 60 aa1.87□□□□□ -2.11
CDC9YDL164C TOR2P32600 2474 aaKnown RBP1.86□□□□□ -2.11
CDC9YDL164C YBR056W-AI2HB52 66 aa1.85□□□□□ -2.11
CDC9YDL164C YDR034C-AP0C289 58 aa1.83□□□□□ -2.12
CDC9YDL164C TEL1P38110 2787 aa1.81□□□□□ -2.12
CDC9YDL164C NUM1Q00402 2748 aa1.78□□□□□ -2.12
CDC9YDL164C TOR1P35169 2470 aa1.71□□□□□ -2.13
CDC9YDL164C YOR072W-BQ3E832 53 aa1.7□□□□□ -2.14
CDC9YDL164C DYN1P36022 4092 aa1.66□□□□□ -2.14
CDC9YDL164C YML054C-AQ3E809 52 aa1.58□□□□□ -2.16
CDC9YDL164C Q0017Q9ZZX8 53 aa1.53□□□□□ -2.16
CDC9YDL164C RPS29BP41058 56 aaKnown RBP1.35□□□□□ -2.19
CDC9YDL164C MDN1Q12019 4910 aaKnown RBP1.34□□□□□ -2.19
CDC9YDL164C CUP1-1P0CX80 61 aa1.33□□□□□ -2.2
CDC9YDL164C CUP1-2P0CX81 61 aa1.33□□□□□ -2.2
CDC9YDL164C YHR050W-AQ05451 56 aa1.32□□□□□ -2.2
CDC9YDL164C RPS29AP41057 56 aaKnown RBP1.25□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 123.7 ms