RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YSY6P38374 65 aa0.71□□□□□ -2.3
TRM3YDL112W YKL183C-AQ3E765 70 aa0.7□□□□□ -2.3
TRM3YDL112W YGR039WP53225 103 aa0.7□□□□□ -2.3
TRM3YDL112W YFL041W-AQ3E817 63 aa0.7□□□□□ -2.3
TRM3YDL112W RPL38P49167 78 aaKnown RBP0.7□□□□□ -2.3
TRM3YDL112W YKL065W-AQ2V2P2 73 aa0.7□□□□□ -2.3
TRM3YDL112W OLI1P61829 76 aa0.69□□□□□ -2.3
TRM3YDL112W YIL156W-BQ2V2P4 73 aa0.69□□□□□ -2.3
TRM3YDL112W EMC6Q12431 108 aa0.69□□□□□ -2.3
TRM3YDL112W MRX7P53869 86 aa0.68□□□□□ -2.3
TRM3YDL112W YOR314WQ12506 109 aa0.68□□□□□ -2.3
TRM3YDL112W YHR125WP38831 101 aa0.67□□□□□ -2.3
TRM3YDL112W YBL044WP38194 122 aa0.67□□□□□ -2.3
TRM3YDL112W YDR182W-AQ3E796 67 aa0.67□□□□□ -2.3
TRM3YDL112W YLR285C-AQ3E771 56 aa0.66□□□□□ -2.3
TRM3YDL112W RPS30AP0CX33 63 aaKnown RBP0.66□□□□□ -2.3
TRM3YDL112W RPS30BP0CX34 63 aaKnown RBP0.66□□□□□ -2.3
TRM3YDL112W YFR032C-BQ8TGU2 87 aa0.65□□□□□ -2.31
TRM3YDL112W ATX1P38636 73 aa0.64□□□□□ -2.31
TRM3YDL112W YOL166W-AQ8TGJ1 51 aa0.64□□□□□ -2.31
TRM3YDL112W YOR394C-AQ8TGJ0 55 aa0.63□□□□□ -2.31
TRM3YDL112W YBR201C-AQ2V2Q3 67 aa0.63□□□□□ -2.31
TRM3YDL112W NOP10Q6Q547 58 aaPredicted RBP0.63□□□□□ -2.31
TRM3YDL112W YDR246W-AQ3E763 66 aa0.62□□□□□ -2.31
TRM3YDL112W OST5Q92316 86 aa0.62□□□□□ -2.31
TRM3YDL112W LSO2Q3E772 92 aaKnown RBP0.62□□□□□ -2.31
TRM3YDL112W INO4P13902 151 aa0.62□□□□□ -2.31
TRM3YDL112W YIL102CP40488 101 aa0.62□□□□□ -2.31
TRM3YDL112W SDH6Q3E785 79 aa0.62□□□□□ -2.31
TRM3YDL112W YER188C-AP0C0V2 99 aa0.61□□□□□ -2.31
TRM3YDL112W YPL038W-AQ3E7B4 63 aa0.61□□□□□ -2.31
TRM3YDL112W ATP17Q06405 101 aa0.6□□□□□ -2.31
TRM3YDL112W YMR001C-AQ8TGS9 76 aa0.58□□□□□ -2.32
TRM3YDL112W YDR119W-AQ2V2P9 66 aa0.58□□□□□ -2.32
TRM3YDL112W YBR121C-AP0C5L4 52 aa0.57□□□□□ -2.32
TRM3YDL112W HUB1Q6Q546 73 aa0.57□□□□□ -2.32
TRM3YDL112W YMR122CQ03879 124 aa0.57□□□□□ -2.32
TRM3YDL112W YFL065CP43539 102 aa0.57□□□□□ -2.32
TRM3YDL112W YPR203WQ08994 102 aa0.57□□□□□ -2.32
TRM3YDL112W YOR072W-BQ3E832 53 aa0.56□□□□□ -2.32
TRM3YDL112W TOM6P33448 61 aa0.56□□□□□ -2.32
TRM3YDL112W SLO1Q3E784 85 aa0.55□□□□□ -2.32
TRM3YDL112W SBH1P52870 82 aa0.52□□□□□ -2.33
TRM3YDL112W YCR108CQ3E819 63 aa0.5□□□□□ -2.33
TRM3YDL112W YHR050W-AQ05451 56 aa0.5□□□□□ -2.33
TRM3YDL112W QCR10P37299 77 aa0.49□□□□□ -2.33
TRM3YDL112W YML100W-AQ8TGT0 57 aa0.48□□□□□ -2.33
TRM3YDL112W YBR072C-AQ3E794 53 aa0.47□□□□□ -2.33
TRM3YDL112W YEL014CP39999 101 aa0.46□□□□□ -2.34
TRM3YDL112W YCR095W-AQ3E787 52 aa0.45□□□□□ -2.34
TRM3YDL112W HHY1P39982 102 aa0.45□□□□□ -2.34
TRM3YDL112W RUB1Q03919 77 aa0.42□□□□□ -2.34
TRM3YDL112W YOR381W-AQ3E804 55 aa0.42□□□□□ -2.34
TRM3YDL112W YNL277W-AQ3E7Z0 62 aa0.38□□□□□ -2.35
TRM3YDL112W YIR021W-AQ3E739 70 aa0.37□□□□□ -2.35
TRM3YDL112W YGL014C-AP0C5N1 53 aa0.37□□□□□ -2.35
TRM3YDL112W RPS28BP0C0X0 67 aaKnown RBP0.36□□□□□ -2.35
TRM3YDL112W RPS28AQ3E7X9 67 aaPredicted RBP0.36□□□□□ -2.35
TRM3YDL112W SOM1Q05676 74 aa0.36□□□□□ -2.35
TRM3YDL112W YLR412C-AQ3E742 68 aa0.33□□□□□ -2.36
TRM3YDL112W YLR157W-EP0CF00 54 aa0.28□□□□□ -2.36
TRM3YDL112W YOL164W-AQ3E7A5 60 aa0.19□□□□□ -2.38
TRM3YDL112W YOR376W-AQ3E805 51 aa0.1□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 42.6 ms