RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W RPL43AP0CX25 92 aaKnown RBP2.28□□□□□ -2.04
TSR1YDL060W RPL43BP0CX26 92 aa2.28□□□□□ -2.04
TSR1YDL060W YCR001WP25347 104 aa2.28□□□□□ -2.04
TSR1YDL060W MRX7P53869 86 aa2.28□□□□□ -2.04
TSR1YDL060W RPL29P05747 59 aaPredicted RBP2.28□□□□□ -2.05
TSR1YDL060W RTC6O14464 93 aa2.27□□□□□ -2.05
TSR1YDL060W YBR027CP38220 110 aa2.27□□□□□ -2.05
TSR1YDL060W BSC4P53841 131 aa2.27□□□□□ -2.05
TSR1YDL060W HOR7Q05827 59 aa2.27□□□□□ -2.05
TSR1YDL060W YAR064WP39563 99 aa2.25□□□□□ -2.05
TSR1YDL060W SDH6Q3E785 79 aa2.25□□□□□ -2.05
TSR1YDL060W YLR307C-AQ3E825 87 aa2.25□□□□□ -2.05
TSR1YDL060W YJL197C-AP0C5P0 93 aa2.23□□□□□ -2.05
TSR1YDL060W YCL042WP25572 119 aa2.23□□□□□ -2.05
TSR1YDL060W YHR212W-AP0CX91 67 aa2.22□□□□□ -2.05
TSR1YDL060W ATP17Q06405 101 aa2.22□□□□□ -2.05
TSR1YDL060W HUB1Q6Q546 73 aa2.21□□□□□ -2.06
TSR1YDL060W YJR128WP47162 119 aa2.21□□□□□ -2.06
TSR1YDL060W YHR086W-AQ3E746 53 aa2.21□□□□□ -2.06
TSR1YDL060W Q0297Q9ZZV8 51 aa2.21□□□□□ -2.06
TSR1YDL060W DYN1P36022 4092 aa2.2□□□□□ -2.06
TSR1YDL060W YBL039W-BP0C268 59 aa2.2□□□□□ -2.06
TSR1YDL060W YGL014C-AP0C5N1 53 aa2.2□□□□□ -2.06
TSR1YDL060W RPC10P40422 70 aa2.2□□□□□ -2.06
TSR1YDL060W CUP1-1P0CX80 61 aa2.18□□□□□ -2.06
TSR1YDL060W CUP1-2P0CX81 61 aa2.18□□□□□ -2.06
TSR1YDL060W SNA2P56508 79 aa2.17□□□□□ -2.06
TSR1YDL060W YDR210WQ03482 75 aa2.17□□□□□ -2.06
TSR1YDL060W YLL066W-BQ8TGJ7 56 aa2.17□□□□□ -2.06
TSR1YDL060W SGF11Q03067 99 aa2.17□□□□□ -2.06
TSR1YDL060W YOR072WQ08486 104 aa2.16□□□□□ -2.06
TSR1YDL060W DDR2P89113 61 aa2.15□□□□□ -2.07
TSR1YDL060W RPL33AP05744 107 aaKnown RBP2.14□□□□□ -2.07
TSR1YDL060W YLR255CO13574 117 aa2.13□□□□□ -2.07
TSR1YDL060W YGR240C-AQ3E786 66 aa2.13□□□□□ -2.07
TSR1YDL060W YCR108CQ3E819 63 aa2.1□□□□□ -2.07
TSR1YDL060W YBR201C-AQ2V2Q3 67 aa2.09□□□□□ -2.07
TSR1YDL060W YGR146C-AQ8TGT9 53 aa2.08□□□□□ -2.08
TSR1YDL060W YOR316C-AQ3E806 69 aa2.06□□□□□ -2.08
TSR1YDL060W RPL37BP51402 88 aaKnown RBP2.04□□□□□ -2.08
TSR1YDL060W YBR016WP38216 128 aa2.02□□□□□ -2.09
TSR1YDL060W YBL044WP38194 122 aa2.02□□□□□ -2.09
TSR1YDL060W YOR394C-AQ8TGJ0 55 aa2.01□□□□□ -2.09
TSR1YDL060W YGL041C-BQ3E750 60 aa2□□□□□ -2.09
TSR1YDL060W YOL097W-AQ3E7Y9 61 aa2□□□□□ -2.09
TSR1YDL060W YDR034C-AP0C289 58 aa1.99□□□□□ -2.09
TSR1YDL060W OLI1P61829 76 aa1.97□□□□□ -2.09
TSR1YDL060W YHR073W-AP0C5N7 58 aa1.96□□□□□ -2.09
TSR1YDL060W YJL009WP47078 108 aa1.95□□□□□ -2.1
TSR1YDL060W LCL1Q02786 101 aa1.9□□□□□ -2.11
TSR1YDL060W MDN1Q12019 4910 aaKnown RBP1.86□□□□□ -2.11
TSR1YDL060W COX7P10174 60 aa1.86□□□□□ -2.11
TSR1YDL060W RPL37AP49166 88 aaKnown RBP1.81□□□□□ -2.12
TSR1YDL060W HHY1P39982 102 aa1.8□□□□□ -2.12
TSR1YDL060W YBR072C-AQ3E794 53 aa1.69□□□□□ -2.14
TSR1YDL060W YOR072W-BQ3E832 53 aa1.67□□□□□ -2.14
TSR1YDL060W YOL164W-AQ3E7A5 60 aa1.63□□□□□ -2.15
TSR1YDL060W YLR157W-EP0CF00 54 aa1.52□□□□□ -2.17
TSR1YDL060W YML054C-AQ3E809 52 aa1.5□□□□□ -2.17
TSR1YDL060W Q0017Q9ZZX8 53 aa1.49□□□□□ -2.17
TSR1YDL060W YHR050W-AQ05451 56 aa1.25□□□□□ -2.21
TSR1YDL060W RPS29BP41058 56 aaKnown RBP1.21□□□□□ -2.22
TSR1YDL060W RPS29AP41057 56 aaKnown RBP1.11□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 5.5 ms