RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W YDR119W-AQ2V2P9 66 aa2.44□□□□□ -2.02
PTC1YDL006W YPL038W-AQ3E7B4 63 aa2.44□□□□□ -2.02
PTC1YDL006W YOL013W-AP0C272 63 aaPredicted RBP2.43□□□□□ -2.02
PTC1YDL006W LIP1Q03579 150 aa2.43□□□□□ -2.02
PTC1YDL006W NOP10Q6Q547 58 aaPredicted RBP2.43□□□□□ -2.02
PTC1YDL006W AIM4P38305 123 aaPredicted RBP2.41□□□□□ -2.02
PTC1YDL006W YOR316C-AQ3E806 69 aa2.4□□□□□ -2.03
PTC1YDL006W YGR164WP53291 111 aa2.39□□□□□ -2.03
PTC1YDL006W TOM6P33448 61 aa2.38□□□□□ -2.03
PTC1YDL006W YJR128WP47162 119 aa2.38□□□□□ -2.03
PTC1YDL006W YDR246W-AQ3E763 66 aa2.38□□□□□ -2.03
PTC1YDL006W YDR182W-AQ3E796 67 aa2.37□□□□□ -2.03
PTC1YDL006W YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
PTC1YDL006W YGR146C-AQ8TGT9 53 aa2.35□□□□□ -2.03
PTC1YDL006W COX8P04039 78 aa2.34□□□□□ -2.03
PTC1YDL006W RPL37BP51402 88 aaKnown RBP2.34□□□□□ -2.03
PTC1YDL006W YKL065W-AQ2V2P2 73 aa2.33□□□□□ -2.04
PTC1YDL006W YLR255CO13574 117 aa2.32□□□□□ -2.04
PTC1YDL006W SDH6Q3E785 79 aa2.32□□□□□ -2.04
PTC1YDL006W RPS30AP0CX33 63 aaKnown RBP2.31□□□□□ -2.04
PTC1YDL006W RPS30BP0CX34 63 aaKnown RBP2.31□□□□□ -2.04
PTC1YDL006W OLI1P61829 76 aa2.31□□□□□ -2.04
PTC1YDL006W Q0017Q9ZZX8 53 aa2.31□□□□□ -2.04
PTC1YDL006W FYV12Q08559 129 aa2.3□□□□□ -2.04
PTC1YDL006W YBR016WP38216 128 aa2.29□□□□□ -2.04
PTC1YDL006W YIL156W-BQ2V2P4 73 aa2.29□□□□□ -2.04
PTC1YDL006W OST5Q92316 86 aa2.29□□□□□ -2.04
PTC1YDL006W YBR201C-AQ2V2Q3 67 aa2.27□□□□□ -2.05
PTC1YDL006W YMR001C-AQ8TGS9 76 aa2.26□□□□□ -2.05
PTC1YDL006W MRX7P53869 86 aa2.25□□□□□ -2.05
PTC1YDL006W HUB1Q6Q546 73 aa2.25□□□□□ -2.05
PTC1YDL006W YML100W-AQ8TGT0 57 aa2.24□□□□□ -2.05
PTC1YDL006W YJL009WP47078 108 aa2.23□□□□□ -2.05
PTC1YDL006W YLR412C-AQ3E742 68 aa2.21□□□□□ -2.06
PTC1YDL006W YIR021W-AQ3E739 70 aa2.2□□□□□ -2.06
PTC1YDL006W YML054C-AQ3E809 52 aa2.19□□□□□ -2.06
PTC1YDL006W YOR381W-AQ3E804 55 aa2.18□□□□□ -2.06
PTC1YDL006W YDR210WQ03482 75 aa2.17□□□□□ -2.06
PTC1YDL006W YBL044WP38194 122 aa2.16□□□□□ -2.06
PTC1YDL006W YMR122CQ03879 124 aa2.16□□□□□ -2.06
PTC1YDL006W YCR095W-AQ3E787 52 aa2.14□□□□□ -2.07
PTC1YDL006W YER188C-AP0C0V2 99 aa2.11□□□□□ -2.07
PTC1YDL006W YOR394C-AQ8TGJ0 55 aa2.11□□□□□ -2.07
PTC1YDL006W SBH1P52870 82 aa2.1□□□□□ -2.07
PTC1YDL006W ATP17Q06405 101 aa2.1□□□□□ -2.07
PTC1YDL006W RPS28BP0C0X0 67 aaKnown RBP2.04□□□□□ -2.08
PTC1YDL006W RPS28AQ3E7X9 67 aaPredicted RBP2.04□□□□□ -2.08
PTC1YDL006W YEL014CP39999 101 aa2.03□□□□□ -2.08
PTC1YDL006W YCR108CQ3E819 63 aa2.01□□□□□ -2.09
PTC1YDL006W RPL37AP49166 88 aaKnown RBP1.99□□□□□ -2.09
PTC1YDL006W QCR10P37299 77 aa1.96□□□□□ -2.1
PTC1YDL006W YOR072W-BQ3E832 53 aa1.95□□□□□ -2.1
PTC1YDL006W RPS29BP41058 56 aaKnown RBP1.92□□□□□ -2.1
PTC1YDL006W YGL014C-AP0C5N1 53 aa1.88□□□□□ -2.11
PTC1YDL006W RPS29AP41057 56 aaKnown RBP1.85□□□□□ -2.11
PTC1YDL006W YNL277W-AQ3E7Z0 62 aa1.85□□□□□ -2.11
PTC1YDL006W HHY1P39982 102 aa1.84□□□□□ -2.11
PTC1YDL006W SOM1Q05676 74 aa1.83□□□□□ -2.12
PTC1YDL006W YBR072C-AQ3E794 53 aa1.78□□□□□ -2.12
PTC1YDL006W YOR376W-AQ3E805 51 aa1.74□□□□□ -2.13
PTC1YDL006W YHR050W-AQ05451 56 aa1.61□□□□□ -2.15
PTC1YDL006W YOL164W-AQ3E7A5 60 aa1.35□□□□□ -2.19
PTC1YDL006W YLR157W-EP0CF00 54 aa1.31□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 5.4 ms