RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C YLR307C-AQ3E825 87 aa3.32□□□□□ -1.88
TUP1YCR084C FMP27Q06179 2628 aa3.31□□□□□ -1.88
TUP1YCR084C DDR2P89113 61 aa3.29□□□□□ -1.88
TUP1YCR084C RDS3Q06835 107 aaPredicted RBP3.29□□□□□ -1.88
TUP1YCR084C YBR201C-AQ2V2Q3 67 aa3.29□□□□□ -1.88
TUP1YCR084C GCN1P33892 2672 aaKnown RBP3.29□□□□□ -1.88
TUP1YCR084C YJL144WP47009 104 aa3.29□□□□□ -1.88
TUP1YCR084C YHR007C-AQ07074 71 aa3.29□□□□□ -1.88
TUP1YCR084C YGL041C-BQ3E750 60 aa3.29□□□□□ -1.88
TUP1YCR084C Q0032Q9ZZX7 96 aa3.28□□□□□ -1.88
TUP1YCR084C TRA1P38811 3744 aa3.28□□□□□ -1.88
TUP1YCR084C YOR072WQ08486 104 aa3.27□□□□□ -1.89
TUP1YCR084C YDR034W-BQ6Q5X2 51 aa3.27□□□□□ -1.89
TUP1YCR084C YGL260WP53056 76 aa3.26□□□□□ -1.89
TUP1YCR084C YHR212W-AP0CX91 67 aa3.22□□□□□ -1.89
TUP1YCR084C GIS2P53849 153 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
TUP1YCR084C YMR230W-AQ3E7B5 62 aa3.19□□□□□ -1.9
TUP1YCR084C YPR117WQ06116 2489 aa3.18□□□□□ -1.9
TUP1YCR084C YDL012CQ12489 107 aa3.17□□□□□ -1.9
TUP1YCR084C YCL042WP25572 119 aa3.16□□□□□ -1.9
TUP1YCR084C LCL1Q02786 101 aa3.16□□□□□ -1.9
TUP1YCR084C YLL066W-BQ8TGJ7 56 aa3.14□□□□□ -1.91
TUP1YCR084C YJR128WP47162 119 aa3.14□□□□□ -1.91
TUP1YCR084C YGR146C-AQ8TGT9 53 aa3.13□□□□□ -1.91
TUP1YCR084C Q0297Q9ZZV8 51 aa3.13□□□□□ -1.91
TUP1YCR084C YOL097W-AQ3E7Y9 61 aa3.12□□□□□ -1.91
TUP1YCR084C PRP8P33334 2413 aaKnown RBP3.11□□□□□ -1.91
TUP1YCR084C UTP20P35194 2493 aaKnown RBP3.1□□□□□ -1.91
TUP1YCR084C RPL43AP0CX25 92 aaKnown RBP3.05□□□□□ -1.92
TUP1YCR084C RPL43BP0CX26 92 aa3.05□□□□□ -1.92
TUP1YCR084C COX7P10174 60 aa3.04□□□□□ -1.92
TUP1YCR084C YHR073W-AP0C5N7 58 aa3.04□□□□□ -1.92
TUP1YCR084C OLI1P61829 76 aa3.04□□□□□ -1.92
TUP1YCR084C YOR316C-AQ3E806 69 aa3.02□□□□□ -1.93
TUP1YCR084C RPL37BP51402 88 aaKnown RBP3.02□□□□□ -1.93
TUP1YCR084C YBR056W-AI2HB52 66 aa3.01□□□□□ -1.93
TUP1YCR084C YOR394C-AQ8TGJ0 55 aa3.01□□□□□ -1.93
TUP1YCR084C YBL044WP38194 122 aa2.98□□□□□ -1.93
TUP1YCR084C TEL1P38110 2787 aa2.97□□□□□ -1.93
TUP1YCR084C YDR034C-AP0C289 58 aa2.97□□□□□ -1.93
TUP1YCR084C YCR108CQ3E819 63 aa2.97□□□□□ -1.93
TUP1YCR084C MEC1P38111 2368 aa2.97□□□□□ -1.93
TUP1YCR084C YBR016WP38216 128 aa2.96□□□□□ -1.93
TUP1YCR084C TOR2P32600 2474 aaKnown RBP2.95□□□□□ -1.94
TUP1YCR084C YJL009WP47078 108 aa2.93□□□□□ -1.94
TUP1YCR084C NUM1Q00402 2748 aa2.87□□□□□ -1.95
TUP1YCR084C YHR086W-AQ3E746 53 aa2.81□□□□□ -1.96
TUP1YCR084C HHY1P39982 102 aa2.77□□□□□ -1.97
TUP1YCR084C YBR072C-AQ3E794 53 aa2.75□□□□□ -1.97
TUP1YCR084C RPL37AP49166 88 aaKnown RBP2.74□□□□□ -1.97
TUP1YCR084C YOR072W-BQ3E832 53 aa2.71□□□□□ -1.98
TUP1YCR084C TOR1P35169 2470 aa2.7□□□□□ -1.98
TUP1YCR084C YML054C-AQ3E809 52 aa2.55□□□□□ -2
TUP1YCR084C DYN1P36022 4092 aa2.54□□□□□ -2
TUP1YCR084C YOL164W-AQ3E7A5 60 aa2.53□□□□□ -2.01
TUP1YCR084C Q0017Q9ZZX8 53 aa2.46□□□□□ -2.02
TUP1YCR084C YLR157W-EP0CF00 54 aa2.37□□□□□ -2.03
TUP1YCR084C CUP1-1P0CX80 61 aa2.33□□□□□ -2.04
TUP1YCR084C CUP1-2P0CX81 61 aa2.33□□□□□ -2.04
TUP1YCR084C YHR050W-AQ05451 56 aa2.13□□□□□ -2.07
TUP1YCR084C MDN1Q12019 4910 aaKnown RBP2.04□□□□□ -2.08
TUP1YCR084C RPS29AP41057 56 aaKnown RBP1.96□□□□□ -2.1
TUP1YCR084C RPS29BP41058 56 aaKnown RBP1.88□□□□□ -2.11
Retrieved 63 of 5,963 RNA–protein pairs in 6.6 ms