RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YGR146C-A	Q8TGT9	53 aa		2.99	□□□□□ -1.93
ATG12	YBR217W	YBL008W-A	Q3E821	79 aa		2.98	□□□□□ -1.93
ATG12	YBR217W	YLR255C	O13574	117 aa		2.97	□□□□□ -1.93
ATG12	YBR217W	YBR016W	P38216	128 aa		2.97	□□□□□ -1.93
ATG12	YBR217W	YGL034C	P53186	121 aa		2.97	□□□□□ -1.93
ATG12	YBR217W	COX8	P04039	78 aa		2.96	□□□□□ -1.94
ATG12	YBR217W	YKL065W-A	Q2V2P2	73 aa		2.96	□□□□□ -1.94
ATG12	YBR217W	YDR246W-A	Q3E763	66 aa		2.93	□□□□□ -1.94
ATG12	YBR217W	YOL166W-A	Q8TGJ1	51 aa		2.93	□□□□□ -1.94
ATG12	YBR217W	YDR119W-A	Q2V2P9	66 aa		2.92	□□□□□ -1.94
ATG12	YBR217W	RPS30A	P0CX33	63 aa	Known RBP	2.91	□□□□□ -1.94
ATG12	YBR217W	RPS30B	P0CX34	63 aa	Known RBP	2.91	□□□□□ -1.94
ATG12	YBR217W	YHR125W	P38831	101 aa		2.91	□□□□□ -1.94
ATG12	YBR217W	RUB1	Q03919	77 aa		2.91	□□□□□ -1.94
ATG12	YBR217W	YIL156W-B	Q2V2P4	73 aa		2.91	□□□□□ -1.94
ATG12	YBR217W	YPL038W-A	Q3E7B4	63 aa		2.9	□□□□□ -1.95
ATG12	YBR217W	OLI1	P61829	76 aa		2.89	□□□□□ -1.95
ATG12	YBR217W	AIM4	P38305	123 aa	Predicted RBP	2.88	□□□□□ -1.95
ATG12	YBR217W	YFR032C-B	Q8TGU2	87 aa		2.88	□□□□□ -1.95
ATG12	YBR217W	YDR182W-A	Q3E796	67 aa		2.84	□□□□□ -1.95
ATG12	YBR217W	YBL044W	P38194	122 aa		2.83	□□□□□ -1.96
ATG12	YBR217W	YML054C-A	Q3E809	52 aa		2.83	□□□□□ -1.96
ATG12	YBR217W	SDH6	Q3E785	79 aa		2.81	□□□□□ -1.96
ATG12	YBR217W	YBR201C-A	Q2V2Q3	67 aa		2.8	□□□□□ -1.96
ATG12	YBR217W	MRX7	P53869	86 aa		2.79	□□□□□ -1.96
ATG12	YBR217W	OST5	Q92316	86 aa		2.79	□□□□□ -1.96
ATG12	YBR217W	TOM6	P33448	61 aa		2.74	□□□□□ -1.97
ATG12	YBR217W	YMR001C-A	Q8TGS9	76 aa		2.73	□□□□□ -1.97
ATG12	YBR217W	HUB1	Q6Q546	73 aa		2.7	□□□□□ -1.98
ATG12	YBR217W	RPS29B	P41058	56 aa	Known RBP	2.67	□□□□□ -1.98
ATG12	YBR217W	YOR394C-A	Q8TGJ0	55 aa		2.65	□□□□□ -1.99
ATG12	YBR217W	RPS29A	P41057	56 aa	Known RBP	2.62	□□□□□ -1.99
ATG12	YBR217W	RPL37A	P49166	88 aa	Known RBP	2.62	□□□□□ -1.99
ATG12	YBR217W	ATP17	Q06405	101 aa		2.58	□□□□□ -2
ATG12	YBR217W	YIL002W-A	Q3E7Z5	69 aa		2.54	□□□□□ -2
ATG12	YBR217W	YMR122C	Q03879	124 aa		2.52	□□□□□ -2.01
ATG12	YBR217W	YER188C-A	P0C0V2	99 aa		2.5	□□□□□ -2.01
ATG12	YBR217W	YOR381W-A	Q3E804	55 aa		2.49	□□□□□ -2.01
ATG12	YBR217W	YCR108C	Q3E819	63 aa		2.49	□□□□□ -2.01
ATG12	YBR217W	YCR095W-A	Q3E787	52 aa		2.46	□□□□□ -2.02
ATG12	YBR217W	YEL014C	P39999	101 aa		2.43	□□□□□ -2.02
ATG12	YBR217W	YER078W-A	Q3E7A2	54 aa		2.39	□□□□□ -2.03
ATG12	YBR217W	YOR072W-B	Q3E832	53 aa		2.36	□□□□□ -2.03
ATG12	YBR217W	YIR021W-A	Q3E739	70 aa		2.31	□□□□□ -2.04
ATG12	YBR217W	QCR10	P37299	77 aa		2.26	□□□□□ -2.05
ATG12	YBR217W	SBH1	P52870	82 aa		2.26	□□□□□ -2.05
ATG12	YBR217W	HHY1	P39982	102 aa		2.2	□□□□□ -2.06
ATG12	YBR217W	YGL014C-A	P0C5N1	53 aa		2.11	□□□□□ -2.07
ATG12	YBR217W	SOM1	Q05676	74 aa		2.08	□□□□□ -2.08
ATG12	YBR217W	YBR072C-A	Q3E794	53 aa		2.05	□□□□□ -2.08
ATG12	YBR217W	YLR412C-A	Q3E742	68 aa		2.03	□□□□□ -2.08
ATG12	YBR217W	RPS28B	P0C0X0	67 aa	Known RBP	2.02	□□□□□ -2.09
ATG12	YBR217W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.02	□□□□□ -2.09
ATG12	YBR217W	YNL277W-A	Q3E7Z0	62 aa		2	□□□□□ -2.09
ATG12	YBR217W	YAL067W-A	Q8TGK6	75 aa		1.98	□□□□□ -2.09
ATG12	YBR217W	YBR121C-A	P0C5L4	52 aa		1.97	□□□□□ -2.09
ATG12	YBR217W	YHR050W-A	Q05451	56 aa		1.96	□□□□□ -2.1
ATG12	YBR217W	YML100W-A	Q8TGT0	57 aa		1.81	□□□□□ -2.12
ATG12	YBR217W	YOR376W-A	Q3E805	51 aa		1.8	□□□□□ -2.12
ATG12	YBR217W	YHR032W-A	P0C5N6	59 aa		1.54	□□□□□ -2.16
ATG12	YBR217W	YLR157W-E	P0CF00	54 aa		1.51	□□□□□ -2.17
ATG12	YBR217W	YHR086W-A	Q3E746	53 aa		1.49	□□□□□ -2.17
ATG12	YBR217W	YOL164W-A	Q3E7A5	60 aa		1.49	□□□□□ -2.17

Retrieved 63 of 5,963 RNA–protein pairs in 116.6 ms