RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YMR122CQ03879 124 aa2.69□□□□□ -1.98
PTA1YAL043C YKL065W-AQ2V2P2 73 aa2.69□□□□□ -1.98
PTA1YAL043C YOL166W-AQ8TGJ1 51 aa2.68□□□□□ -1.98
PTA1YAL043C YPR153WQ06537 140 aa2.68□□□□□ -1.98
PTA1YAL043C HOT13P36078 116 aa2.67□□□□□ -1.98
PTA1YAL043C YAR064WP39563 99 aa2.67□□□□□ -1.98
PTA1YAL043C RPL36AP05745 100 aaPredicted RBP2.65□□□□□ -1.98
PTA1YAL043C YJL197C-AP0C5P0 93 aa2.65□□□□□ -1.99
PTA1YAL043C YOL013W-AP0C272 63 aaPredicted RBP2.64□□□□□ -1.99
PTA1YAL043C LCL2Q08045 131 aa2.64□□□□□ -1.99
PTA1YAL043C YDR182W-AQ3E796 67 aa2.64□□□□□ -1.99
PTA1YAL043C YIL156W-BQ2V2P4 73 aa2.63□□□□□ -1.99
PTA1YAL043C YGL149WP53116 101 aa2.61□□□□□ -1.99
PTA1YAL043C YLR157W-DP0CE99 70 aa2.6□□□□□ -1.99
PTA1YAL043C MRX7P53869 86 aa2.6□□□□□ -1.99
PTA1YAL043C YDL012CQ12489 107 aa2.6□□□□□ -1.99
PTA1YAL043C YCR095W-AQ3E787 52 aa2.59□□□□□ -1.99
PTA1YAL043C YER078W-AQ3E7A2 54 aa2.58□□□□□ -2
PTA1YAL043C YHR125WP38831 101 aa2.58□□□□□ -2
PTA1YAL043C YJR128WP47162 119 aa2.58□□□□□ -2
PTA1YAL043C SDH6Q3E785 79 aa2.57□□□□□ -2
PTA1YAL043C YMR001C-AQ8TGS9 76 aa2.56□□□□□ -2
PTA1YAL043C YJR085CP47131 105 aaKnown RBP2.54□□□□□ -2
PTA1YAL043C LCL1Q02786 101 aa2.54□□□□□ -2
PTA1YAL043C YJL144WP47009 104 aa2.53□□□□□ -2
PTA1YAL043C YNL122CP53921 115 aaPredicted RBP2.53□□□□□ -2
PTA1YAL043C YOL097W-AQ3E7Y9 61 aa2.53□□□□□ -2
PTA1YAL043C HUB1Q6Q546 73 aa2.53□□□□□ -2
PTA1YAL043C CMC4Q3E7A9 73 aa2.51□□□□□ -2.01
PTA1YAL043C YOR316C-AQ3E806 69 aa2.5□□□□□ -2.01
PTA1YAL043C YHR032W-AP0C5N6 59 aa2.5□□□□□ -2.01
PTA1YAL043C YFL067WP43537 175 aa2.49□□□□□ -2.01
PTA1YAL043C ATP17Q06405 101 aa2.49□□□□□ -2.01
PTA1YAL043C YDR210WQ03482 75 aa2.48□□□□□ -2.01
PTA1YAL043C YBR201C-AQ2V2Q3 67 aa2.47□□□□□ -2.01
PTA1YAL043C COX8P04039 78 aa2.47□□□□□ -2.01
PTA1YAL043C YEL014CP39999 101 aa2.47□□□□□ -2.01
PTA1YAL043C YGR146C-AQ8TGT9 53 aa2.46□□□□□ -2.01
PTA1YAL043C YGL014C-AP0C5N1 53 aa2.44□□□□□ -2.02
PTA1YAL043C YLR255CO13574 117 aa2.43□□□□□ -2.02
PTA1YAL043C YHR073W-AP0C5N7 58 aa2.43□□□□□ -2.02
PTA1YAL043C OLI1P61829 76 aa2.42□□□□□ -2.02
PTA1YAL043C COX7P10174 60 aa2.4□□□□□ -2.03
PTA1YAL043C YAL067W-AQ8TGK6 75 aa2.4□□□□□ -2.03
PTA1YAL043C YBR016WP38216 128 aa2.38□□□□□ -2.03
PTA1YAL043C YBL044WP38194 122 aa2.34□□□□□ -2.03
PTA1YAL043C MDN1Q12019 4910 aaKnown RBP2.34□□□□□ -2.04
PTA1YAL043C RPL37BP51402 88 aaKnown RBP2.32□□□□□ -2.04
PTA1YAL043C YCR108CQ3E819 63 aa2.32□□□□□ -2.04
PTA1YAL043C YOR394C-AQ8TGJ0 55 aa2.24□□□□□ -2.05
PTA1YAL043C YJL009WP47078 108 aa2.18□□□□□ -2.06
PTA1YAL043C RPL37AP49166 88 aaKnown RBP2.1□□□□□ -2.07
PTA1YAL043C HHY1P39982 102 aa2.09□□□□□ -2.08
PTA1YAL043C Q0017Q9ZZX8 53 aa2.08□□□□□ -2.08
PTA1YAL043C YML054C-AQ3E809 52 aa2.06□□□□□ -2.08
PTA1YAL043C YOR072W-BQ3E832 53 aa2.05□□□□□ -2.08
PTA1YAL043C YBR072C-AQ3E794 53 aa1.95□□□□□ -2.1
PTA1YAL043C YHR086W-AQ3E746 53 aa1.92□□□□□ -2.1
PTA1YAL043C YOL164W-AQ3E7A5 60 aa1.79□□□□□ -2.12
PTA1YAL043C YLR157W-EP0CF00 54 aa1.62□□□□□ -2.15
PTA1YAL043C YHR050W-AQ05451 56 aa1.62□□□□□ -2.15
PTA1YAL043C RPS29BP41058 56 aaKnown RBP1.59□□□□□ -2.15
PTA1YAL043C RPS29AP41057 56 aaKnown RBP1.5□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 5.4 ms