RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 HHF1P02309 103 aaKnown RBP5.61□□□□□ -1.51
LSR1LSR1 YER188C-AP0C0V2 99 aa5.61□□□□□ -1.51
LSR1LSR1 YBR027CP38220 110 aa5.6□□□□□ -1.51
LSR1LSR1 YJR085CP47131 105 aaKnown RBP5.6□□□□□ -1.51
LSR1LSR1 YMR001C-AQ8TGS9 76 aa5.6□□□□□ -1.51
LSR1LSR1 LCL2Q08045 131 aa5.55□□□□□ -1.52
LSR1LSR1 YCR095W-AQ3E787 52 aa5.54□□□□□ -1.52
LSR1LSR1 YDL012CQ12489 107 aa5.52□□□□□ -1.53
LSR1LSR1 YFR032C-BQ8TGU2 87 aa5.5□□□□□ -1.53
LSR1LSR1 LCL1Q02786 101 aa5.49□□□□□ -1.53
LSR1LSR1 YHR073W-AP0C5N7 58 aa5.48□□□□□ -1.53
LSR1LSR1 YDR010CQ12426 110 aa5.48□□□□□ -1.53
LSR1LSR1 MMS2P53152 137 aa5.46□□□□□ -1.54
LSR1LSR1 ATP17Q06405 101 aa5.41□□□□□ -1.54
LSR1LSR1 YGR146C-AQ8TGT9 53 aa5.41□□□□□ -1.54
LSR1LSR1 YLR255CO13574 117 aa5.38□□□□□ -1.55
LSR1LSR1 COX8P04039 78 aa5.38□□□□□ -1.55
LSR1LSR1 YJR128WP47162 119 aa5.38□□□□□ -1.55
LSR1LSR1 YBR201C-AQ2V2Q3 67 aa5.37□□□□□ -1.55
LSR1LSR1 YGL149WP53116 101 aa5.34□□□□□ -1.55
LSR1LSR1 DDR48P18899 430 aaKnown RBP5.33□□□□□ -1.56
LSR1LSR1 YOR316C-AQ3E806 69 aa5.33□□□□□ -1.56
LSR1LSR1 YBL008W-AQ3E821 79 aa5.32□□□□□ -1.56
LSR1LSR1 YML100W-AQ8TGT0 57 aa5.32□□□□□ -1.56
LSR1LSR1 YNL122CP53921 115 aaPredicted RBP5.3□□□□□ -1.56
LSR1LSR1 MRX7P53869 86 aa5.28□□□□□ -1.56
LSR1LSR1 OLI1P61829 76 aa5.28□□□□□ -1.56
LSR1LSR1 YIL156W-BQ2V2P4 73 aa5.28□□□□□ -1.56
LSR1LSR1 COX7P10174 60 aa5.27□□□□□ -1.57
LSR1LSR1 YOR376W-AQ3E805 51 aa5.23□□□□□ -1.57
LSR1LSR1 YBR016WP38216 128 aa5.19□□□□□ -1.58
LSR1LSR1 RPL37BP51402 88 aaKnown RBP5.17□□□□□ -1.58
LSR1LSR1 YGL034CP53186 121 aa5.14□□□□□ -1.59
LSR1LSR1 FYV12Q08559 129 aa5.13□□□□□ -1.59
LSR1LSR1 YJL144WP47009 104 aa5.11□□□□□ -1.59
LSR1LSR1 MDN1Q12019 4910 aaKnown RBP5.07□□□□□ -1.6
LSR1LSR1 YGL014C-AP0C5N1 53 aa5.06□□□□□ -1.6
LSR1LSR1 YFL067WP43537 175 aa5.04□□□□□ -1.6
LSR1LSR1 QCR10P37299 77 aa5.03□□□□□ -1.6
LSR1LSR1 YEL014CP39999 101 aa5.01□□□□□ -1.61
LSR1LSR1 YOR394C-AQ8TGJ0 55 aa4.9□□□□□ -1.63
LSR1LSR1 YBL044WP38194 122 aa4.88□□□□□ -1.63
LSR1LSR1 YCR108CQ3E819 63 aa4.87□□□□□ -1.63
LSR1LSR1 SOM1Q05676 74 aa4.84□□□□□ -1.63
LSR1LSR1 CMC4Q3E7A9 73 aa4.78□□□□□ -1.64
LSR1LSR1 Q0017Q9ZZX8 53 aa4.76□□□□□ -1.65
LSR1LSR1 YML054C-AQ3E809 52 aa4.73□□□□□ -1.65
LSR1LSR1 RPL37AP49166 88 aaKnown RBP4.71□□□□□ -1.66
LSR1LSR1 YOR072W-BQ3E832 53 aa4.66□□□□□ -1.66
LSR1LSR1 YJL009WP47078 108 aa4.61□□□□□ -1.67
LSR1LSR1 YDR210WQ03482 75 aa4.59□□□□□ -1.67
LSR1LSR1 YBR072C-AQ3E794 53 aa4.57□□□□□ -1.68
LSR1LSR1 HHY1P39982 102 aa4.51□□□□□ -1.69
LSR1LSR1 YER175W-AQ8TGU4 54 aa4.22□□□□□ -1.73
LSR1LSR1 YER078W-AQ3E7A2 54 aa4.1□□□□□ -1.75
LSR1LSR1 YHR050W-AQ05451 56 aa3.75□□□□□ -1.81
LSR1LSR1 YHR032W-AP0C5N6 59 aa3.74□□□□□ -1.81
LSR1LSR1 YOL164W-AQ3E7A5 60 aa3.62□□□□□ -1.83
LSR1LSR1 RPS29BP41058 56 aaKnown RBP3.6□□□□□ -1.83
LSR1LSR1 YAL067W-AQ8TGK6 75 aa3.58□□□□□ -1.84
LSR1LSR1 RPS29AP41057 56 aaKnown RBP3.35□□□□□ -1.87
LSR1LSR1 YLR157W-EP0CF00 54 aa3.2□□□□□ -1.9
LSR1LSR1 YHR086W-AQ3E746 53 aa2.78□□□□□ -1.96
Retrieved 63 of 5,963 RNA–protein pairs in 39.8 ms