RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 C1QAP02745 245 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 MSH2P43246 934 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 ACVR2BQ13705 512 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 KRT81Q14533 505 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 KBTBD12Q3ZCT8 623 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 CEP57Q86XR8 500 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 PDIK1LQ8N165 341 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 BANPQ8N9N5 519 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 SLC35F5Q8WV83 523 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 C10orf82Q8WW14 230 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 PTPRN2Q92932 1015 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 FAF2Q96CS3 445 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 KLHL29Q96CT2 875 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 SNRNP25Q9BV90 132 aaKnown RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 FAM49AQ9H0Q0 323 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 CYLDQ9NQC7 956 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 ARHGEF3Q9NR81 526 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 RAB6BQ9NRW1 208 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 SENP1Q9P0U3 644 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 KANSL3Q9P2N6 904 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 TEX264Q9Y6I9 313 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 RBM47A0AV96 593 aaKnown RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 CFAP73A6NFT4 308 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 STAU1O95793 577 aaKnown RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 PHBP35232 272 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 GRM5P41594 1212 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 HDAC4P56524 1084 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 YWHAZP63104 245 aaKnown RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 OVGP1Q12889 678 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 SLC10A2Q12908 348 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 ZNF618Q5T7W0 954 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 GPRC5AQ8NFJ5 357 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 LRRC8CQ8TDW0 803 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 UTP4Q969X6 686 aaKnown RBP9.75□□□□□ -0.85
NECAP1-225ENST00000640209 GRAMD1AQ96CP6 724 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 ERP27Q96DN0 273 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 TBC1D31Q96DN5 1066 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 CFAP36Q96G28 342 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 SLC4A5Q9BY07 1137 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 PHACTR1Q9C0D0 580 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 STK38LQ9Y2H1 464 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 MFHAS1Q9Y4C4 1052 aa9.75□□□□□ -0.85
NECAP1-225ENST00000640209 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 CXorf49A8MYA2 514 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 UGT1A9O60656 530 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 CCDC130P13994 396 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 CCNB1P14635 433 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 YWHAGP61981 247 aaKnown RBP eCLIP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SLC6A3Q01959 620 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SNAPC2Q13487 334 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 HIC1Q14526 733 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 PREPLQ4J6C6 727 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 PPP6R3Q5H9R7 873 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SH2D5Q6ZV89 423 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 CAND1Q86VP6 1230 aaKnown RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 NETO2Q8NC67 525 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 TMEM237Q96Q45 408 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 NXF3Q9H4D5 531 aaKnown RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 UGT1A7Q9HAW7 530 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 UGT1A10Q9HAW8 530 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 UGT1A8Q9HAW9 530 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 VTA1Q9NP79 307 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 FETUBQ9UGM5 382 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 L3MBTL1Q9Y468 752 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 KAT6AQ92794 2004 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 PLXNB2O15031 1838 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 PDHXO00330 501 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 DPYSL4O14531 572 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 NDC80O14777 642 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 MMP3P08254 477 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 PDGFRBP09619 1106 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 T-ENOLP0DO92 83 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 AKAP5P24588 427 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 LMO2P25791 158 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 STIP1P31948 543 aaKnown RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 TFDP2Q14188 446 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SOWAHAQ2M3V2 549 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 KLHL38Q2WGJ6 581 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 ACCSLQ4AC99 568 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 LDLRAD1Q5T700 205 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SLC9A4Q6AI14 798 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SMYD5Q6GMV2 418 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 TMEM110Q86TL2 294 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 RFWD2Q8NHY2 731 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 NDRG1Q92597 394 aaKnown RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SNX27Q96L92 541 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 APOL6Q9BWW8 343 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 NPHS2Q9NP85 383 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 SMYD2Q9NRG4 433 aa9.74□□□□□ -0.85
NECAP1-225ENST00000640209 TTLL3Q9Y4R7 772 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms