RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ASS1P00966 412 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 C1QAP02745 245 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 PSAPP07602 524 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 BPGMP07738 259 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 MRPS5P82675 430 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 TBC1D25Q3MII6 688 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 KCNT1Q5JUK3 1230 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 DARS2Q6PI48 645 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 FAF2Q96CS3 445 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 CFAP36Q96G28 342 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 NGLY1Q96IV0 654 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 MSTO1Q9BUK6 570 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 UBE2OQ9C0C9 1292 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 CYP26B1Q9NR63 512 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 PAK5Q9P286 719 aa15.39■□□□□ 0.05
CACNA1A-220ENST00000635988 A0A0B4J269 797 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 KITP10721 976 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 IL1R2P27930 398 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 RPS6P62753 249 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 ACAP1Q15027 740 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 CYP4A22Q5TCH4 519 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 WDTC1Q8N5D0 677 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 GSTCDQ8NEC7 633 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 LRRC39Q96DD0 335 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 BTBD9Q96Q07 612 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 ZCWPW1Q9H0M4 648 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 DHX33Q9H6R0 707 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 ZC3H7BQ9UGR2 993 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 SEPT9Q9UHD8 586 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 CNTNAP2Q9UHC6 1331 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 AP1G1O43747 822 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 ATP9BO43861 1147 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 PEX1O43933 1283 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 VCLP18206 1134 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 YWHAEP62258 255 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 NOMO1Q15155 1222 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 PABPC1LQ4VXU2 614 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 SH2D4BQ5SQS7 431 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 LCA5Q86VQ0 697 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC25A41Q8N5S1 370 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC13A1Q9BZW2 595 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 PXMP2Q9NR77 195 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 MARCOQ9UEW3 520 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 ITGA11Q9UKX5 1188 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 PHF24Q9UPV7 400 aa15.38■□□□□ 0.05
CACNA1A-220ENST00000635988 TCP10L2B9ZVM9 353 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 MYL4P12829 197 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 SERPINB9P50453 376 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 COPAP53621 1224 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 TFDP2Q14188 446 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 ARFGAP1Q8N6T3 406 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 HIC2Q96JB3 615 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 NIF3L1Q9GZT8 377 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 CISHQ9NSE2 258 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 APOBEC2Q9Y235 224 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 CCDC195A0A1B0GUA6 201 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 K7ERI5 159 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 C6orf222P0C671 652 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 OSBPP22059 807 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 YWHAZP63104 245 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 PDE1BQ01064 536 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 UBAP2LQ14157 1087 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 MMEL1Q495T6 779 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 STXBP5Q5T5C0 1151 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 ARHGEF16Q5VV41 709 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 SPATA24Q86W54 205 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 PPP1R14CQ8TAE6 165 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 PIWIL2Q8TC59 973 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC26A7Q8TE54 656 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 LHX5Q9H2C1 402 aa15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 XAB2Q9HCS7 855 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-220ENST00000635988 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 TBC1D12O60347 775 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 VAV1P15498 845 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 RGS2P41220 211 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 RANBP1P43487 201 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 ERFP50548 548 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CLCN2P51788 898 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CHN2P52757 468 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 GRM1Q13255 1194 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 R3HDM1Q15032 1099 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 ANKRD20A4Q4UJ75 823 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 SFT2D3Q587I9 215 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 SWSAP1Q6NVH7 229 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 PGM2L1Q6PCE3 622 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 WDR49Q8IV35 697 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CCDC33Q8N5R6 958 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 DEPTORQ8TB45 409 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 ACTRT2Q8TDY3 377 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 GDPD5Q8WTR4 605 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 PYDC1Q8WXC3 89 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 NLRP4Q96MN2 994 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms