RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 NAP1L5Q96NT1 182 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NT5C1BQ96P26 610 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TTLL2Q9BWV7 592 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MAGEB5Q9BZ81 275 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NLRC4Q9NPP4 1024 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SLC2A4RGQ9NR83 387 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TMPRSS4Q9NRS4 437 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 FAM207AQ9NSI2 230 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 WNT16Q9UBV4 365 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 HCN2Q9UL51 889 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SIT1Q9Y3P8 196 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF263O14978 683 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TLR5O60602 858 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 EGFP01133 1207 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 FYNP06241 537 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 POU2F2P09086 479 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MBL2P11226 248 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 HNRNPLP14866 589 aaKnown RBP eCLIP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CDC25CP30307 473 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CTHP32929 405 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SEC13P55735 322 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NHLH1Q02575 133 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 RAPGEF1Q13905 1077 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 MTF1Q14872 753 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TPD52L1Q16890 204 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CDKAL1Q5VV42 579 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ELMSAN1Q6PJG2 1045 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CYP26C1Q6V0L0 522 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TMEM25Q86YD3 366 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 UBALD2Q8IYN6 164 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 FRMD1Q8N878 549 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 C2orf15Q8WU43 125 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TRMT2BQ96GJ1 504 aaKnown RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 LTB4R2Q9NPC1 389 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NAGPAQ9UK23 515 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ASB3Q9Y575 518 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 NUMA1Q14980 2115 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 KANSL1LA0AUZ9 987 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SPECC1L-ADORA2AF8WAN1 911 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 M0QYV0 167 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TRIM66O15016 1216 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF132P52740 706 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 EML3Q32P44 896 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 VWA3BQ502W6 1294 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 SYPL2Q5VXT5 272 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 E4F1Q66K89 784 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-208ENST00000614678 RHBDF2Q6PJF5 856 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TOGARAM2Q6ZUX3 1019 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 UNC93AQ86WB7 457 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 TRPV4Q9HBA0 871 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 CD93Q9NPY3 652 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 IL37Q9NZH6 218 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 HSFX1Q9UBD0 423 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 DNAJC12Q9UKB3 198 aa6.01□□□□□ -1.45
CPNE3-208ENST00000614678 GOLGA6L7A0A1B0GV03 622 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 DPYSL4O14531 572 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ZDHHC11BP0C7U3 371 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 KPNA1P52294 538 aaPredicted RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 EFEMP1Q12805 493 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 HEATR6Q6AI08 1181 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 MTSS1LQ765P7 747 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 SUGP1Q8IWZ8 645 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 ADGRG2Q8IZP9 1017 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ZNF606Q8WXB4 792 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 FAM3CQ92520 227 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 TAF4BQ92750 862 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 METTL14Q9HCE5 456 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 ST7Q9NRC1 585 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 TRPM5Q9NZQ8 1165 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 WDR3Q9UNX4 943 aaKnown RBP eCLIP6□□□□□ -1.45
CPNE3-208ENST00000614678 WASH3PC4AMC7 463 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 OLFM2O95897 454 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CHRNB1P11230 501 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 RARGP13631 454 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 GJA4P35212 333 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 GALK1P51570 392 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ATXN1P54253 815 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 STARD6P59095 220 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 ARID5AQ03989 594 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 GOLGA8FQ08AF8 430 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 GOLGA8DPQ0D2H9 430 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 EXOC3L4Q17RC7 722 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC183Q5T5S1 534 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 FSTL4Q6MZW2 842 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 SLC35F5Q8WV83 523 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CPXM1Q96SM3 734 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 DDX23Q9BUQ8 820 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 LSM14BQ9BX40 385 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 OXCT2Q9BYC2 517 aaPredicted RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 LMAN1LQ9HAT1 526 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CYP3A43Q9HB55 503 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 DUS2Q9NX74 493 aaKnown RBP6□□□□□ -1.45
CPNE3-208ENST00000614678 NAALADL1Q9UQQ1 740 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 INVSQ9Y283 1065 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 EML5Q05BV3 1969 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 FAM92AA1XBS5 289 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 E5RJQ4 531 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CYP17A1P05093 508 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 CCDC192P0DO97 292 aa6□□□□□ -1.45
CPNE3-208ENST00000614678 P4HA1P13674 534 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms