RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CACHD1Q5VU97 1274 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 FAM47EQ6ZV65 393 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 HDDC2Q7Z4H3 204 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TTC7BQ86TV6 843 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 PALM2Q8IXS6 379 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 DIS3L2Q8IYB7 885 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 OR52K2Q8NGK3 314 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 OR6S1Q8NH40 331 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF420Q8TAQ5 688 aaPredicted RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CDK5RAP1Q96SZ6 601 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 MIPEPQ99797 713 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 CDK19Q9BWU1 502 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 IL25Q9H293 177 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 HIPK3Q9H422 1215 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 NCOR1P1Q9H4R4 102 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 MRPL40Q9NQ50 206 aaKnown RBP9.19□□□□□ -0.94
COMMD3-215ENST00000602574 RAB26Q9ULW5 256 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 WASF2Q9Y6W5 498 aa9.19□□□□□ -0.94
COMMD3-215ENST00000602574 TOPAZ1Q8N9V7 1692 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 FAM170AA1A519 330 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF98A6NK75 572 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 FAM25AB3EWG3 89 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 FAM25CB3EWG5 89 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 FAM25GB3EWG6 89 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 MAGEB2O15479 319 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 RGS16O15492 202 aaPredicted RBP9.18□□□□□ -0.94
COMMD3-215ENST00000602574 TOM1O60784 492 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 PTP4A3O75365 173 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 THRAP10827 490 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 LIMK1P53667 647 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 TPTEP56180 551 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 ERVK-21P61565 698 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 PPARAQ07869 468 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 CGB2Q6NT52 195 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 LINC00299Q6ZSB3 139 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 ADCK1Q86TW2 530 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 HID1Q8IV36 788 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 KBTBD3Q8NAB2 608 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 PDPRQ8NCN5 879 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 GANCQ8TET4 914 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 FAM172AQ8WUF8 416 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 TWNKQ96RR1 684 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 NUP88Q99567 741 aaPredicted RBP9.18□□□□□ -0.94
COMMD3-215ENST00000602574 CCDC106Q9BWC9 280 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 EMILIN2Q9BXX0 1053 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 NARFLQ9H6Q4 476 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 EPS8L2Q9H6S3 715 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 ERVMER34-1Q9H9K5 563 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 GIMAP4Q9NUV9 329 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 RIC8BQ9NVN3 520 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
COMMD3-215ENST00000602574 LIMA1Q9UHB6 759 aaKnown RBP9.18□□□□□ -0.94
COMMD3-215ENST00000602574 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 RTL9Q8NET4 1388 aa9.18□□□□□ -0.94
COMMD3-215ENST00000602574 H3BSA7 217 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 LAD1O00515 517 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 TNPO2O14787 897 aaKnown RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 LILRB3O75022 631 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 CYP3A4P08684 503 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 HMOX1P09601 288 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 RPS6KB1P23443 525 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ABCG1P45844 678 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 CDK16Q00536 496 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 BAMBIQ13145 260 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 MORC3Q14149 939 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ADGRE1Q14246 886 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ATAD3BQ5T9A4 648 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 FAM91A1Q658Y4 838 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SDE2Q6IQ49 451 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 CRTC1Q6UUV9 634 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 UNC5AQ6ZN44 842 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 RGS9BPQ6ZS82 235 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 AK8Q96MA6 479 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 DOK1Q99704 481 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 DBNDD1Q9H9R9 158 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 HPS4Q9NQG7 708 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SACM1LQ9NTJ5 587 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 FAM105AQ9NUU6 356 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 HECAQ9UBI9 543 aaPredicted RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 TEKT2Q9UIF3 430 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SYNJ2BP-COX16A0A087WUM0 186 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 A6NL46 340 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 DNAJC6O75061 913 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SPAG7O75391 227 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SRGAP2CP0DJJ0 459 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 POU2F1P14859 743 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 SOX5P35711 763 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 POU6F2P78424 691 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms