RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 THAP9Q9H5L6 903 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 LMAN1LQ9HAT1 526 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 CLIC5Q9NZA1 410 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 GVINP1Q7Z2Y8 2422 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 XPO1O14980 1071 aaKnown RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 CYP26A1O43174 497 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 LAMTOR5O43504 91 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 GREM1O60565 184 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 TLR5O60602 858 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 SETSIPP0DME0 302 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 MBL2P11226 248 aaPredicted RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 SLC8A3P57103 927 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 BST2Q10589 180 aaKnown RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 PON2Q15165 354 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 STILQ15468 1287 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 MEA1Q16626 185 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 GAB4Q2WGN9 574 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 PM20D1Q6GTS8 502 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 ZC3H14Q6PJT7 736 aaKnown RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 LCLAT1Q6UWP7 414 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 ENOSF1Q7L5Y1 443 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 PIGZQ86VD9 579 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 ADGRG2Q8IZP9 1017 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 PPM1KQ8N3J5 372 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 SPEM1Q8N4L4 309 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 ZBTB44Q8NCP5 570 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 GPT2Q8TD30 523 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 EXOC4Q96A65 974 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 FAM81BQ96LP2 452 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 CDK5RAP1Q96SZ6 601 aaKnown RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 LINC00597Q9H2U6 94 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM4-209ENST00000588483 SPATA6Q9NWH7 488 aaPredicted RBP11.06□□□□□ -0.64
TPM4-209ENST00000588483 OSER1Q9NX31 292 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 TSPAN16Q9UKR8 245 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 PCDHGA2Q9Y5H1 932 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 WNT6Q9Y6F9 365 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 KIAA1549LQ6ZVL6 1849 aa11.06□□□□□ -0.64
TPM4-209ENST00000588483 ABL1P00519 1130 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 DRD1P21728 446 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 HOXA6P31267 233 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 EIF2DP41214 584 aaKnown RBP11.05□□□□□ -0.64
TPM4-209ENST00000588483 CCR3P51677 355 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 LRMPQ12912 555 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 NR1H3Q13133 447 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 CNGA2Q16280 664 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 GOLGA7BQ2TAP0 167 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 FBXO43Q4G163 708 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 FSTL4Q6MZW2 842 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 TRIM65Q6PJ69 517 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 TMEM270Q6UE05 265 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 SCD5Q86SK9 330 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 TADA2BQ86TJ2 420 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 ARHGEF19Q8IW93 802 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 TTC8Q8TAM2 541 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 KCTD13Q8WZ19 329 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 KAT5Q92993 513 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
TPM4-209ENST00000588483 NMUR1Q9HB89 426 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 SMPD4Q9NXE4 827 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 CFAP97Q9P2B7 532 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 HESX1Q9UBX0 185 aa11.05□□□□□ -0.64
TPM4-209ENST00000588483 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM4-209ENST00000588483 PTPRZ1P23471 2315 aaPredicted RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 MYOFQ9NZM1 2061 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 A0A1W2PQH9 124 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 PRR23AA6NEV1 266 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 CHURC1-FNTBB4DL54 471 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 LILRB5O75023 590 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 CYP17A1P05093 508 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 ATP5C1P36542 298 aaKnown RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 RPL34P49207 117 aaKnown RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 PDE4CQ08493 712 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 GRSF1Q12849 480 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM4-209ENST00000588483 PPP2R5DQ14738 602 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 HTR3DQ70Z44 454 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 BHLHA9Q7RTU4 235 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 ALYREFQ86V81 257 aaKnown RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 ARHGAP18Q8N392 663 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 RBBP8NLQ8NC74 664 aaPredicted RBP11.04□□□□□ -0.64
TPM4-209ENST00000588483 SLC35F5Q8WV83 523 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 TFAP2BQ92481 460 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 CD101Q93033 1021 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 P2RY13Q9BPV8 354 aa11.04□□□□□ -0.64
TPM4-209ENST00000588483 RBM12Q9NTZ6 932 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms