RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
SMIM28-201ENST00000573100 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
SMIM28-201ENST00000573100 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
SMIM28-201ENST00000573100 HCN2Q9UL51 889 aa13.07□□□□□ -0.32
SMIM28-201ENST00000573100 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
SMIM28-201ENST00000573100 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
SMIM28-201ENST00000573100 PLXNB3Q9ULL4 1909 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 MAST4O15021 2626 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 GOLGA8IPA6NC78 632 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 GOLGA8JA6NMD2 632 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 CBFA2T3O75081 653 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 GARTP22102 1010 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 WARSP23381 471 aaKnown RBP13.06□□□□□ -0.32
SMIM28-201ENST00000573100 MAOBP27338 520 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
SMIM28-201ENST00000573100 GRIK2Q13002 908 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 NOC3LQ8WTT2 800 aaKnown RBP13.06□□□□□ -0.32
SMIM28-201ENST00000573100 ERLEC1Q96DZ1 483 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 ACOX2Q99424 681 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 DKK4Q9UBT3 224 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 PCOLCE2Q9UKZ9 415 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 KIF3AQ9Y496 699 aa13.06□□□□□ -0.32
SMIM28-201ENST00000573100 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
SMIM28-201ENST00000573100 CABIN1Q9Y6J0 2220 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 TRIM24O15164 1050 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 COCHO43405 550 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 YWHAQP27348 245 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 IFRD2Q12894 506 aaPredicted RBP13.05□□□□□ -0.32
SMIM28-201ENST00000573100 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
SMIM28-201ENST00000573100 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 GRAMD4Q6IC98 578 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 ANKRD36BP1Q96IX9 119 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 CD248Q9HCU0 757 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 INTS13Q9NVM9 706 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 TBC1D7Q9P0N9 293 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
SMIM28-201ENST00000573100 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
SMIM28-201ENST00000573100 A0A1B0GTW7 788 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 TNNC2P02585 160 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 GAP43P17677 238 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 PTPN1P18031 435 aaKnown RBP13.04□□□□□ -0.32
SMIM28-201ENST00000573100 LONP1P36776 959 aaKnown RBP13.04□□□□□ -0.32
SMIM28-201ENST00000573100 CYP4F3Q08477 520 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 DNASE2BQ8WZ79 361 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 FBXO32Q969P5 355 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 ZFRQ96KR1 1074 aaKnown RBP13.04□□□□□ -0.32
SMIM28-201ENST00000573100 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 GABRG3Q99928 467 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
SMIM28-201ENST00000573100 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 ELOVL4Q9GZR5 314 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
SMIM28-201ENST00000573100 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
SMIM28-201ENST00000573100 MEI4A8MW99 385 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 H3BQV1 296 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
SMIM28-201ENST00000573100 GCNT3O95395 438 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 ZNF883P0CG24 379 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 CD6P30203 668 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 CACNA2D1P54289 1103 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 C19orf57Q0VDD7 668 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 SURF1Q15526 300 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
SMIM28-201ENST00000573100 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 OVCA2Q8WZ82 227 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 TOE1Q96GM8 510 aaKnown RBP13.03□□□□□ -0.32
SMIM28-201ENST00000573100 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
SMIM28-201ENST00000573100 CDC6Q99741 560 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 MRPL45Q9BRJ2 306 aaKnown RBP13.03□□□□□ -0.32
SMIM28-201ENST00000573100 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 NACA2Q9H009 215 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 GAREM1Q9H706 876 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 PRDM16Q9HAZ2 1276 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 IL21RQ9HBE5 538 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 CD93Q9NPY3 652 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 TM7SF3Q9NS93 570 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 NFE2L3Q9Y4A8 694 aa13.03□□□□□ -0.32
SMIM28-201ENST00000573100 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms