RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 H3BQF6 201 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 M0QZQ0 153 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SGK1O00141 431 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ARPP19P56211 112 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 HDAC4P56524 1084 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 B4GALNT4Q76KP1 1039 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 FAM131BQ86XD5 332 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SPATA2LQ8IUW3 424 aaPredicted RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 MAP7D3Q8IWC1 876 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ADAM32Q8TC27 787 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ACTL9Q8TC94 416 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 LRRC45Q96CN5 670 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 B3GALT6Q96L58 329 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 TBCBQ99426 244 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SNRNP25Q9BV90 132 aaKnown RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 SEZ6LQ9BYH1 1024 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 DHX35Q9H5Z1 703 aaKnown RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 VIPAS39Q9H9C1 493 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 WBP1LQ9NX94 342 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 C3orf70A6NLC5 250 aaPredicted RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 TBKBP1A7MCY6 615 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 M0QYT0 321 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 TRAPPC3O43617 180 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 LIASO43766 372 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 MAP3K6O95382 1288 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ALDH2P05091 517 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 NCAM1P13591 858 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ATF2P15336 505 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 GRIK1P39086 918 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 MATKP42679 507 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 OTUD4Q01804 1114 aaKnown RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 DSC1Q08554 894 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ADCY1Q08828 1119 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 FAAP100Q0VG06 881 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 CA9Q16790 459 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SKIDA1Q1XH10 827 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 TCTN1Q2MV58 587 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SLC39A12Q504Y0 691 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 BOLA3Q53S33 107 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 FAM171A1Q5VUB5 890 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SYPL2Q5VXT5 272 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 C1orf228Q6PIY5 440 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 SCN4BQ8IWT1 228 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ZMIZ2Q8NF64 920 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 CMASQ8NFW8 434 aaPredicted RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 SEC14L1Q92503 715 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 PGLYRP2Q96PD5 576 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 MAGEB5Q9BZ81 275 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 CYLDQ9NQC7 956 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 ABI2Q9NYB9 513 aaPredicted RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 MTRF1LQ9UGC7 380 aaKnown RBP7.38□□□□□ -1.23
SMG1-215ENST00000568239 NAALADL1Q9UQQ1 740 aa7.38□□□□□ -1.23
SMG1-215ENST00000568239 YJEFN3A6XGL0 299 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 E7ENQ6 273 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DPYSL4O14531 572 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 NRP1O14786 923 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 KRT14P02533 472 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 CYP11A1P05108 521 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ZSCAN5DPP0CG00 497 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ETS1P14921 441 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 GYS2P54840 703 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 PITX1P78337 314 aaPredicted RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 NNTQ13423 1086 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ERMARDQ5T6L9 678 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 FAM117BQ6P1L5 589 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 ZC3H18Q86VM9 953 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 TAB3Q8N5C8 712 aaPredicted RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 SLC7A14Q8TBB6 771 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMG1-215ENST00000568239 KCTD13Q8WZ19 329 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 EDEM1Q92611 657 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DDX23Q9BUQ8 820 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 CENPHQ9H3R5 247 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 NRDE2Q9H7Z3 1164 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 PRDM5Q9NQX1 630 aaPredicted RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DNAJC17Q9NVM6 304 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 FAM53CQ9NYF3 392 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 VPS18Q9P253 973 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 STAP1Q9ULZ2 295 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 FAN1Q9Y2M0 1017 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 HEY1Q9Y5J3 304 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 CYP2F1P24903 491 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 PTPN9P43378 593 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 RPL34P49207 117 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 ARSEP51690 589 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DRG2P55039 364 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 LMNB2Q03252 620 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 DPYSL3Q14195 570 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 MAPRE1Q15691 268 aaKnown RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 SLC25A52Q3SY17 297 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 FAM182AQ5T1J6 154 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 FAM171BQ6P995 826 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 NPNTQ6UXI9 565 aa7.37□□□□□ -1.23
SMG1-215ENST00000568239 CYP4V2Q6ZWL3 525 aaPredicted RBP7.37□□□□□ -1.23
SMG1-215ENST00000568239 CCDC185Q8N715 623 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms