RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CCNT2O60583 730 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 VPS4BO75351 444 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 RPP40O75818 363 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ALDH1A2O94788 518 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PGM3O95394 542 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 DBHP09172 617 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 UBL4AP11441 157 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 LAMP2P13473 410 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ALADP13716 330 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 IL2RBP14784 551 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PFKLP17858 780 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SDHBP21912 280 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SCP2P22307 547 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TGM1P22735 817 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 GUCY1A2P33402 732 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TRHRP34981 398 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 MSH2P43246 934 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 MAGEA10P43363 369 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 MMP14P50281 582 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PDE6CP51160 858 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PPP5CP53041 499 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PSMC6P62333 389 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 KRT17Q04695 432 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 COG2Q14746 738 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 MED22Q15528 200 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 BAK1Q16611 211 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TRIM71Q2Q1W2 868 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 MMEL1Q495T6 779 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 DUSP28Q4G0W2 176 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PABPC1LQ4VXU2 614 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 LRRC24Q50LG9 513 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PLA1AQ53H76 456 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF484Q5JVG2 852 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 AFMIDQ63HM1 303 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 KANK2Q63ZY3 851 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ISM2Q6H9L7 571 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 IL27RAQ6UWB1 636 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 CRELD2Q6UXH1 353 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 RAPH1Q70E73 1250 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 UBE3BQ7Z3V4 1068 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 LCA5Q86VQ0 697 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TTC30AQ86WT1 665 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PLXDC1Q8IUK5 500 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 UNC5BQ8IZJ1 945 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 OR8H1Q8NGG4 311 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 GABPB2Q8TAK5 448 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ETNPPLQ8TBG4 499 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 LINC01599Q8WXQ3 324 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SPAG5Q96R06 1193 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 FNBP1Q96RU3 617 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 EYA3Q99504 573 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 NCAPGQ9BPX3 1015 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 CPEB1Q9BZB8 566 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TTYH3Q9C0H2 523 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TINAGL1Q9GZM7 467 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 HAPLN2Q9GZV7 340 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SMARCAD1Q9H4L7 1026 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 RABEP2Q9H5N1 569 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 IL21RQ9HBE5 538 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SPON1Q9HCB6 807 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PDE7BQ9NP56 450 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 PCDHB16Q9NRJ7 776 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 SIRT5Q9NXA8 310 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TAB2Q9NYJ8 693 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TAS2R10Q9NYW0 307 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 CNOT7Q9UIV1 285 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ZFP69BQ9UJL9 534 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ODF2LQ9ULJ1 636 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP11BQ9Y2G3 1177 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 HCFC2Q9Y5Z7 792 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 ZFP37Q9Y6Q3 630 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM169AQ9Y6X4 670 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 A0A1W2PQ09 198 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A18PA6NE21 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A16PA6NEW6 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PRSS29PA6NIE9 313 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A9PA6NNJ1 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A5PA8MXJ8 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 NUDT19A8MXV4 375 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 H0Y626 953 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 TAF4O00268 1085 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 UBE2CO00762 179 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SH2B2O14492 632 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ZSCAN9O15535 394 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC7A4O43246 635 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 RRP9O43818 475 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 HNRNPCL1O60812 293 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 KIF20AO95235 890 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 NTSR2O95665 410 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 EFEMP2O95967 443 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 IGHDP01880 384 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP5BP06576 529 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 WEE2P0C1S8 567 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 ZGLP1P0C6A0 271 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A15PP0C7V4 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM90A14PP0C7W9 464 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 THEGLP0DJG4 465 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PIM1P11309 404 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PI3P19957 117 aa3.62□□□□□ -1.83
HERPUD1-211ENST00000566550 PRKCHP24723 683 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms