RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 FAM49BQ9NUQ9 324 aa18.03■□□□□ 0.48
SPSB3-202ENST00000563668 RAB20Q9NX57 234 aa18.03■□□□□ 0.48
SPSB3-202ENST00000563668 SIT1Q9Y3P8 196 aa18.03■□□□□ 0.48
SPSB3-202ENST00000563668 MRFAP1Q9Y605 127 aa18.03■□□□□ 0.48
SPSB3-202ENST00000563668 TICRRQ7Z2Z1 1910 aa18.02■□□□□ 0.48
SPSB3-202ENST00000563668 KANSL1LA0AUZ9 987 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 GALR2O43603 387 aaPredicted RBP18.02■□□□□ 0.47
SPSB3-202ENST00000563668 PLEKP08567 350 aaPredicted RBP18.02■□□□□ 0.47
SPSB3-202ENST00000563668 P4HA1P13674 534 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 WEE1P30291 646 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 PRKCQQ04759 706 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 INCA1Q0VD86 236 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.47
SPSB3-202ENST00000563668 SLC35F6Q8N357 371 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 LRRN4CLQ8ND94 238 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 FBXL13Q8NEE6 735 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 ZMIZ2Q8NF64 920 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 PJA1Q8NG27 643 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 MRPS31Q92665 395 aaKnown RBP18.02■□□□□ 0.47
SPSB3-202ENST00000563668 IRF7Q92985 503 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 FAM122AQ96E09 287 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 ELOVL4Q9GZR5 314 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 NIF3L1Q9GZT8 377 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 TRPC7Q9HCX4 862 aa18.02■□□□□ 0.47
SPSB3-202ENST00000563668 ANAPC1Q9H1A4 1944 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 TRIM66O15016 1216 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 IPO7O95373 1038 aaKnown RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 RFX1P22670 979 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 TARSP26639 723 aaKnown RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 ANXA13P27216 316 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 EIF4A3P38919 411 aaKnown RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 SOX9P48436 509 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 POLR2FP61218 127 aaKnown RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 TNK2Q07912 1038 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 IFRD2Q12894 506 aaPredicted RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 FZD5Q13467 585 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 ASTE1Q2TB18 679 aaPredicted RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 HGSNATQ68CP4 663 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 CCDC105Q8IYK2 499 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 DTWD2Q8NBA8 298 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 SCAMP5Q8TAC9 235 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 SLC2A14Q8TDB8 520 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 DNASE1L2Q92874 299 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 JAKMIP2Q96AA8 810 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 E2F7Q96AV8 911 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 TNIP3Q96KP6 325 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 SMOQ99835 787 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 MED10Q9BTT4 135 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 TTLL2Q9BWV7 592 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 NLRC4Q9NPP4 1024 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 FAM86C1Q9NVL1 165 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 GTSE1Q9NYZ3 720 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 GCNT4Q9P109 453 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 UXTQ9UBK9 157 aaPredicted RBP18.01■□□□□ 0.47
SPSB3-202ENST00000563668 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
SPSB3-202ENST00000563668 SSU72P8A0A1W2PR75 194 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 GTPBP10A4D1E9 387 aaKnown RBP18■□□□□ 0.47
SPSB3-202ENST00000563668 FAM170BA6NMN3 283 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 DPYSL4O14531 572 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TNFRSF10BO14763 440 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 CHADO15335 359 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 CILPO75339 1184 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 KIF11P52732 1056 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 VAV2P52735 878 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 ZXDBP98169 803 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TAF10Q12962 218 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TUBB2AQ13885 445 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 UBXN2BQ14CS0 331 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 ZNF394Q53GI3 561 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 SFMBT2Q5VUG0 894 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 KIAA1328Q86T90 577 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 UNC93AQ86WB7 457 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 YAF2Q8IY57 180 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 ZNF687Q8N1G0 1237 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 CELF5Q8N6W0 485 aaKnown RBP18■□□□□ 0.47
SPSB3-202ENST00000563668 ARL14EPQ8N8R7 260 aaPredicted RBP18■□□□□ 0.47
SPSB3-202ENST00000563668 BPIFB1Q8TDL5 484 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 SHDQ96IW2 340 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TUBB2BQ9BVA1 445 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 LTB4R2Q9NPC1 389 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 KRT82Q9NSB4 513 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 TDP1Q9NUW8 608 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 USP34Q70CQ2 3546 aa18■□□□□ 0.47
SPSB3-202ENST00000563668 ZNF638Q14966 1978 aaKnown RBP17.99■□□□□ 0.47
SPSB3-202ENST00000563668 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 RCCD1A6NED2 376 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 SERPING1P05155 500 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 DDX6P26196 483 aaKnown RBP eCLIP17.99■□□□□ 0.472e-6■■■■□ 26.3
SPSB3-202ENST00000563668 PON1P27169 355 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 AVPR1AP37288 418 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 PGFP49763 221 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 SPA17Q15506 151 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 CCDC122Q5T0U0 273 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 GBP6Q6ZN66 633 aa17.99■□□□□ 0.47
SPSB3-202ENST00000563668 NAPGQ99747 312 aaPredicted RBP17.99■□□□□ 0.47
SPSB3-202ENST00000563668 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms