RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PTCH2Q9Y6C5 1203 aa19.13■□□□□ 0.65
SDR39U1-220ENST00000556548 AP1G2O75843 785 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 MAP3K6O95382 1288 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 FAM200BP0CF97 657 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 RPL34P49207 117 aaKnown RBP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 NRLP54845 237 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 TRAF7Q6Q0C0 670 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 DEFB106AQ8N104 65 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 ATP6V1G3Q96LB4 118 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 TBCBQ99426 244 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 LRRC4Q9HBW1 653 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 RSPH14Q9UHP6 348 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 DRG1Q9Y295 367 aaKnown RBP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 EFR3BQ9Y2G0 817 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 FKTNO75072 461 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 ACSL3O95573 720 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 RARGP13631 454 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 MAP2K2P36507 400 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 PITX1P78337 314 aaPredicted RBP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 ADCY1Q08828 1119 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 SLMAPQ14BN4 828 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 ZC3H18Q86VM9 953 aaKnown RBP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 LRRN4Q8WUT4 740 aa19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 NKD2Q969F2 451 aaPredicted RBP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDR39U1-220ENST00000556548 TLDC2A0PJX2 215 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 RIPK2O43353 540 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 ITGAVP06756 1048 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 DESP17661 470 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 IL4RP24394 825 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 HPDP32754 393 aaPredicted RBP19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 EIF3EP60228 445 aaKnown RBP19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 BOLA3Q53S33 107 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 DCAF6Q58WW2 860 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 CD300LGQ6UXG3 332 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 SIX6OS1Q8N1H7 587 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 SLAIN1Q8ND83 568 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 SPATA18Q8TC71 538 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 SMOQ99835 787 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 RTP3Q9BQQ7 232 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 ADAM7Q9H2U9 754 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 CDC42EP4Q9H3Q1 356 aaKnown RBP19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 B4GALT3O60512 393 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 TKTL1P51854 596 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 GRIK3Q13003 919 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 TUSC3Q13454 348 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 HFE2Q6ZVN8 426 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 GPRIN1Q7Z2K8 1008 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 ZNF598Q86UK7 904 aaKnown RBP19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 FAM35AQ86V20 835 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 UNC45BQ8IWX7 931 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 CCDC185Q8N715 623 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 LINC01599Q8WXQ3 324 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 TMEM209Q96SK2 561 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 PCDH18Q9HCL0 1135 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 TRIM17Q9Y577 477 aa19.11■□□□□ 0.65
SDR39U1-220ENST00000556548 APOC4-APOC2K7ER74 178 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 ENDOD1O94919 500 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 APOC2P02655 101 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 ODC1P11926 461 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 MRPS5P82675 430 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 FAM131BQ86XD5 332 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 ZNF280BQ86YH2 543 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 TTC13Q8NBP0 860 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 RSAD2Q8WXG1 361 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 RNF157Q96PX1 679 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 TSEN34Q9BSV6 310 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 DHX35Q9H5Z1 703 aaKnown RBP19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 CYLDQ9NQC7 956 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 RGS18Q9NS28 235 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 HEY1Q9Y5J3 304 aa19.1■□□□□ 0.65
SDR39U1-220ENST00000556548 DCDC2CA8MYV0 355 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 NRP1O14786 923 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 PTPN9P43378 593 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 SLCO1A2P46721 670 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 SULT1E1P49888 294 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 EFHC1Q5JVL4 640 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 HP1BP3Q5SSJ5 553 aaPredicted RBP19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 MAP7D3Q8IWC1 876 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 FAM71DQ8N9W8 422 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 MYCBPAPQ8TBZ2 947 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 C11orf84Q9BUA3 381 aaPredicted RBP19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 CDH9Q9ULB4 789 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 ARVCFO00192 962 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 CAND2O75155 1236 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 GNRH1P01148 92 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 FAM163BP0C2L3 166 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 RBP3P10745 1247 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 KYNUQ16719 465 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 ANKRD20A8PQ5CZ79 823 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 ERMARDQ5T6L9 678 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 HIBCHQ6NVY1 386 aaPredicted RBP19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 CCDC33Q8N5R6 958 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 ZMIZ2Q8NF64 920 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 P3H4Q92791 437 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 MYLPFQ96A32 169 aa19.09■□□□□ 0.65
SDR39U1-220ENST00000556548 ULBP1Q9BZM6 244 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms