RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	RFPL1	O75677	317 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	ARIH2	O95376	493 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	GNAI3	P08754	354 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	TYR	P14679	529 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	FDXR	P22570	491 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	CYP2C19	P33261	490 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZNF135	P52742	658 aa	Predicted RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	USP14	P54578	494 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZNF844	Q08AG5	666 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCDC157	Q569K6	752 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	ABHD17B	Q5VST6	288 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCDC30	Q5VVM6	783 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	NXN	Q6DKJ4	435 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	TAPT1	Q6NXT6	567 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	AGBL3	Q8NEM8	1001 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	DIS3L	Q8TF46	1054 aa	Known RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	LINC00476	Q8WZB0	136 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	MED15	Q96RN5	788 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	MRPL46	Q9H2W6	279 aa	Known RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	R3HDML	Q9H3Y0	253 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	MYOZ2	Q9NPC6	264 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	KMT5A	Q9NQR1	393 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	SIDT1	Q9NXL6	827 aa	Known RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	NOB1	Q9ULX3	412 aa	Known RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	AGAP1	Q9UPQ3	857 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	PCDHAC2	Q9Y5I4	1007 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	SCN9A	Q15858	1988 aa		6.26	□□□□□ -1.41
PSMC6-208	ENST00000554956	PRPF3	O43395	683 aa	Known RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	SCGB1D2	O95969	90 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	FTH1P19	P0C7X4	201 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	MYB	P10242	640 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	KCNA2	P16389	499 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	LPO	P22079	712 aa	Predicted RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	PLA2G5	P39877	138 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCT4	P50991	539 aa	Known RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	SOX10	P56693	466 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	FOXI1	Q12951	378 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	GCKR	Q14397	625 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	PLS1	Q14651	629 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CD300E	Q496F6	205 aa	Predicted RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CRB2	Q5IJ48	1285 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	EPHA10	Q5JZY3	1008 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CERS5	Q8N5B7	392 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	AOPEP	Q8N6M6	819 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	PPP1R35	Q8TAP8	253 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	SSH3	Q8TE77	659 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CAVIN3	Q969G5	261 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	FUBP1	Q96AE4	644 aa	Known RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZBED3	Q96IU2	234 aa	Predicted RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	WDCP	Q9H6R7	721 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	ARMT1	Q9H993	441 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	GNL3L	Q9NVN8	582 aa	Known RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	CFAP97	Q9P2B7	532 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZNF609	O15014	1411 aa		6.25	□□□□□ -1.41
PSMC6-208	ENST00000554956	TRGV11	A0A075B6L2	103 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCDC195	A0A1B0GUA6	201 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956		A0A1W2PS29	197 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956		H3BUI4	141 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	TOR1B	O14657	336 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	TAF5L	O75529	589 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SUN1	O94901	812 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	DDX58	O95786	925 aa	Known RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	CSF1R	P07333	972 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	HKR1	P10072	659 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	TGM1	P22735	817 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SEC24C	P53992	1094 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	NKX6-1	P78426	367 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	CALD1	Q05682	793 aa	Known RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	EXOSC9	Q06265	439 aa	Known RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	KIF22	Q14807	665 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	TWISTNB	Q3B726	338 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	B3GNT9	Q6UX72	402 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	PDSS2	Q86YH6	399 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SCAMP4	Q969E2	229 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	PTCD3	Q96EY7	689 aa	Known RBP	6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SLC35A4	Q96G79	324 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	AIFM3	Q96NN9	605 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	CASS4	Q9NQ75	786 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	TBCCD1	Q9NVR7	557 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	PNPO	Q9NVS9	261 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	RLIM	Q9NVW2	624 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SAGE1	Q9NXZ1	904 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	PACSIN3	Q9UKS6	424 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	STXBP5L	Q9Y2K9	1186 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	SALL3	Q9BXA9	1300 aa		6.24	□□□□□ -1.41
PSMC6-208	ENST00000554956	MED23	Q9ULK4	1368 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	PRAMEF33	A0A0G2JMD5	474 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	MYADML2	A6NDP7	307 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	PRAMEF10	O60809	474 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	RARB	P10826	455 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	CHRM3	P20309	590 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	AVPR1B	P47901	424 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	CHRND	Q07001	517 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	PIGF	Q07326	219 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	PRKG1	Q13976	671 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms