RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 INPP4AQ96PE3 977 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 TRMT61BQ9BVS5 477 aaKnown RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 AMNQ9BXJ7 453 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 TBC1D13Q9NVG8 400 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CHMP5Q9NZZ3 219 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 SLC8A2Q9UPR5 921 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 BACE2Q9Y5Z0 518 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 KALRNO60229 2985 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 ANKRD17O75179 2603 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ABCA12Q86UK0 2595 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ENO4A6NNW6 628 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 DCLK1O15075 740 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 RNF113AO15541 343 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 EXTL3O43909 919 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 CDC45O75419 566 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 SOD2P04179 222 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ALDH2P05091 517 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ATP5JP18859 108 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PTMSP20962 102 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 FGFR4P22455 802 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 GDI1P31150 447 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 KPNA1P52294 538 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 IRX4P78413 519 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 SLC7A5Q01650 507 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PABPC1LQ4VXU2 614 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 TAF1BQ53T94 588 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 HSP90AB4PQ58FF6 505 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 TANGO2Q6ICL3 276 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 CCNI2Q6ZMN8 369 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 TAS1R1Q7RTX1 841 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ZNF280BQ86YH2 543 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 KIAA0319LQ8IZA0 1049 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 HDDC3Q8N4P3 179 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PNPLA1Q8N8W4 532 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 URGCPQ8TCY9 931 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 RCC1LQ96I51 464 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ZNF668Q96K58 619 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 ZC3H10Q96K80 434 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 SENP7Q9BQF6 1050 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 HERC2P3Q9BVR0 1158 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 LNPKQ9C0E8 428 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 MAP3K20Q9NYL2 800 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PRG3Q9Y2Y8 225 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 MRPS23Q9Y3D9 190 aaKnown RBP6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PAXBP1Q9Y5B6 917 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 SLC12A7Q9Y666 1083 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 PCNX2A6NKB5 2137 aa6.32□□□□□ -1.4
ATXN3-226ENST00000554350 A0A0U1RQF3 1178 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 C7orf72A4D263 438 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 SLC28A2O43868 658 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 RPL17P18621 184 aaKnown RBP6.31□□□□□ -1.4
ATXN3-226ENST00000554350 HOXA6P31267 233 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 DDIT3P35638 169 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 NOVP48745 357 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 ATXN3P54252 364 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-226ENST00000554350 FAM193AP78312 1265 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 LMAN2Q12907 356 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 DGKKQ5KSL6 1271 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 TTC22Q5TAA0 569 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 CASC1Q6TDU7 716 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 TRMT1LQ7Z2T5 733 aaKnown RBP6.31□□□□□ -1.4
ATXN3-226ENST00000554350 HSCBQ8IWL3 235 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 CSGALNACT1Q8TDX6 532 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 PIGKQ92643 395 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 ELSPBP1Q96BH3 223 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 B3GALT6Q96L58 329 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 SYT3Q9BQG1 590 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 APOL6Q9BWW8 343 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 ZFP14Q9HCL3 533 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 ZNF334Q9HCZ1 680 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-226ENST00000554350 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 DACT1Q9NYF0 836 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
ATXN3-226ENST00000554350 AKT3Q9Y243 479 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 INVSQ9Y283 1065 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 TEX15Q9BXT5 2789 aa6.31□□□□□ -1.4
ATXN3-226ENST00000554350 A0A087WV48 116 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 SLC38A8A6NNN8 435 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 NRP1O14786 923 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 ZNF263O14978 683 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 MEFVO15553 781 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-226ENST00000554350 ORC4O43929 436 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 B4GALT3O60512 393 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 ATP9AO75110 1047 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 AKAP3O75969 853 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 C8BP07358 591 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 HNRNPA1P09651 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-226ENST00000554350 SNHG28P0DPA3 235 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 ITPKBP27987 946 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 OR1G1P47890 313 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 DHPSP49366 369 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-226ENST00000554350 SEPHS1P49903 392 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 STAT5BP51692 787 aa6.3□□□□□ -1.4
ATXN3-226ENST00000554350 MFAP1P55081 439 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms