RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 PMS2P54278 862 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 GRIK3Q13003 919 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 TUSC3Q13454 348 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 OASLQ15646 514 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DEFB106AQ8N104 65 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 SNF8Q96H20 258 aa13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-206ENST00000553888 SGK1O00141 431 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 RPLP2P05387 115 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 OR4Q2P0C623 313 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 IL4RP24394 825 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 RPL9P32969 192 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 PTPN7P35236 360 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 RPL34P49207 117 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ARSEP51690 589 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 TAZQ16635 292 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 P3H1Q32P28 736 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 SYPL2Q5VXT5 272 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 C1orf228Q6PIY5 440 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 NETO2Q8NC67 525 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ADAM32Q8TC27 787 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 GRK7Q8WTQ7 553 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 MYLPFQ96A32 169 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 GNRH1P01148 92 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 FAM200BP0CF97 657 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 TKTL1P51854 596 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 VCPP55072 806 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 KRT81Q14533 505 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ACAP1Q15027 740 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 DCAF6Q58WW2 860 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 OTUD1Q5VV17 481 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ZC3H18Q86VM9 953 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 FAM131BQ86XD5 332 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 GOLGA6L1Q8N7Z2 621 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 ULBP1Q9BZM6 244 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-206ENST00000553888 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 SMIM23A6NLE4 172 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 BDNFP23560 247 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 LHX1P48742 406 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 RHBDF2Q6PJF5 856 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 DNAJC14Q6Y2X3 702 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 SLC35B2Q8TB61 432 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 RSPH1Q8WYR4 309 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 SCLYQ96I15 445 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 HSFY1Q96LI6 401 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 C11orf84Q9BUA3 381 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 MFHAS1Q9Y4C4 1052 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 LAMA3Q16787 3333 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 ODC1P11926 461 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 GAD2Q05329 585 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 MTM1Q13496 603 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 TTC19Q6DKK2 380 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 FAM126BQ8IXS8 530 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 ADAM7Q9H2U9 754 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 PCDH18Q9HCL0 1135 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 WHRNQ9P202 907 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 ANAPC5Q9UJX4 755 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 NAALADL1Q9UQQ1 740 aa13.3□□□□□ -0.28
VIPAS39-206ENST00000553888 YJEFN3A6XGL0 299 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 E7ENQ6 273 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 ENDOD1O94919 500 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 SULT1E1P49888 294 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 GPS1Q13098 491 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 SYCP2LQ5T4T6 812 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 ZDHHC17Q8IUH5 632 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 SIX6OS1Q8N1H7 587 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
VIPAS39-206ENST00000553888 DHX35Q9H5Z1 703 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms