RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ULBP1Q9BZM6 244 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 RNF208Q9H0X6 261 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 FAM114A2Q9NRY5 505 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 NUP205Q92621 2012 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 H0YGN5 161 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 GOT1P17174 413 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 CYP2F1P24903 491 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 HSPA9P38646 679 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 BASP1P80723 227 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 GBE1Q04446 702 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 PCSK9Q8NBP7 692 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 UPF3AQ9H1J1 476 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 H7C0C1 242 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 AMPD1P23109 780 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 IL4RP24394 825 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ATP5OP48047 213 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 MAGOHP61326 146 aaKnown RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CLLU1OSQ5K130 101 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 TMEM173Q86WV6 379 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SLC7A14Q8TBB6 771 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SMOQ99835 787 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 RTP3Q9BQQ7 232 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CNPY3Q9BT09 278 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ACBD3Q9H3P7 528 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CDC42EP4Q9H3Q1 356 aaKnown RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 I6L893 689 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 M0QYT0 321 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 STK25O00506 426 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 C2CD2LO14523 706 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 NBNO60934 754 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 GAS8O95995 478 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 RBP3P10745 1247 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 NCAM1P13591 858 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 GABRB2P47870 512 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SEC24CP53992 1094 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 DPYSL3Q14195 570 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 DDR2Q16832 855 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 TMEM110Q86TL2 294 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SIX6OS1Q8N1H7 587 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 DEPDC1BQ8WUY9 529 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 RBM41Q96IZ5 413 aaKnown RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 SLC4A5Q9BY07 1137 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 GDAP2Q9NXN4 497 aa12.49□□□□□ -0.41
CCDC38-202ENST00000546386 ABI2Q9NYB9 513 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-202ENST00000546386 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CAPN9O14815 690 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SCAMP3O14828 347 aaKnown RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 NPR3P17342 541 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SULT1E1P49888 294 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 BCAT1P54687 386 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 OLIG2Q13516 323 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CCNG2Q16589 344 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 XKR4Q5GH76 650 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 DENND2CQ68D51 928 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 DARS2Q6PI48 645 aaKnown RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 NT5DC4Q86YG4 428 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 PCDH19Q8TAB3 1148 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MGARPQ8TDB4 240 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 ZNF638Q14966 1978 aaKnown RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 FAM187AA6NFU0 413 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MYZAPP0CAP1 466 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CYP2C18P33260 490 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 TRIM71Q2Q1W2 868 aaKnown RBP12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CRYBG2Q8N1P7 616 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 CCDC110Q8TBZ0 833 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 ART4Q93070 314 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MYLPFQ96A32 169 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SNF8Q96H20 258 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 TNIP3Q96KP6 325 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms