RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MATKP42679 507 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 DR1Q01658 176 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 GUCY2DQ02846 1103 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 CUL1Q13616 776 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 TAZQ16635 292 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 C15orf59Q2T9L4 293 aaPredicted RBP17.64■□□□□ 0.42
COPS3-212ENST00000539941 BOLA3Q53S33 107 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 TXNRD3NBQ6F5E7 133 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 MFSD7Q6UXD7 560 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 HDXQ7Z353 690 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 TEKT4Q8WW24 435 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 RAPGEF5Q92565 580 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 SLCO2A1Q92959 643 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 OXCT2Q9BYC2 517 aaPredicted RBP17.64■□□□□ 0.42
COPS3-212ENST00000539941 RAB17Q9H0T7 212 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 ZWILCHQ9H900 591 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 EPB41L5Q9HCM4 733 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 MARCH5Q9NX47 278 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 DONSONQ9NYP3 566 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 NLRC5Q86WI3 1866 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 A0A087WUV0 522 aaPredicted RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 OR6C75A6NL08 312 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 HHLA1C9JL84 531 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 ZMYND10O75800 440 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 GALTP07902 379 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 FGFR3P22607 806 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 COILP38432 576 aaPredicted RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 CDKN2BP42772 138 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 YWHAZP63104 245 aaKnown RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 MRPS25P82663 173 aaKnown RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 MRPL58Q14197 206 aaKnown RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 NFE2Q16621 373 aaPredicted RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 ZNF280DQ6N043 979 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 CCDC137Q6PK04 289 aaKnown RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 STRADAQ7RTN6 431 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 LRRTM3Q86VH5 581 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 FAM172AQ8WUF8 416 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 IRGQQ8WZA9 623 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 SEC14L1Q92503 715 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 VWCEQ96DN2 955 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 FUBP3Q96I24 572 aaKnown RBP eCLIP17.64■□□□□ 0.41
COPS3-212ENST00000539941 PRO3102Q9H379 93 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 TMLHEQ9NVH6 421 aa17.64■□□□□ 0.41
COPS3-212ENST00000539941 UTP11Q9Y3A2 253 aaKnown RBP17.64■□□□□ 0.41
COPS3-212ENST00000539941 C3orf70A6NLC5 250 aaPredicted RBP17.63■□□□□ 0.41
COPS3-212ENST00000539941 TTI1O43156 1089 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 SASH3O75995 380 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 BDNFP23560 247 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 KDELR1P24390 212 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 NOS2P35228 1153 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 DAOAP59103 153 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 ATP11AP98196 1134 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 CCNG2Q16589 344 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 VARS2Q5ST30 1063 aaKnown RBP17.63■□□□□ 0.41
COPS3-212ENST00000539941 FAM171A1Q5VUB5 890 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 FUT10Q6P4F1 479 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.418e-7■■□□□ 12.7
COPS3-212ENST00000539941 VSIG1Q86XK7 387 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 SLC2A13Q96QE2 648 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 TMEM209Q96SK2 561 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 HERPUD2Q9BSE4 406 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 ULBP1Q9BZM6 244 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 NGRNQ9NPE2 291 aaKnown RBP17.63■□□□□ 0.41
COPS3-212ENST00000539941 TMEM30AQ9NV96 361 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 KLHL11Q9NVR0 708 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 PCSK1NQ9UHG2 260 aa17.63■□□□□ 0.41
COPS3-212ENST00000539941 PATJQ8NI35 1801 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 PI4K2BG5E9Z4 385 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 DGKIO75912 1065 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 PTGIRP43119 386 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 CACNA2D1P54289 1103 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 EPHB4P54760 987 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 CDO1Q16878 200 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 SH3PXD2AQ5TCZ1 1133 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 EMBQ6PCB8 327 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 CHRDL2Q6WN34 429 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 CYP4V2Q6ZWL3 525 aaPredicted RBP17.62■□□□□ 0.41
COPS3-212ENST00000539941 PACS2Q86VP3 889 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 AENQ8WTP8 325 aaKnown RBP17.62■□□□□ 0.41
COPS3-212ENST00000539941 GRK7Q8WTQ7 553 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 FAM149B1Q96BN6 582 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 PEBP4Q96S96 227 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 TRIM62Q9BVG3 475 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 HEMGNQ9BXL5 484 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 FRMD8P1Q9BZ68 369 aaPredicted RBP17.62■□□□□ 0.41
COPS3-212ENST00000539941 DCLK3Q9C098 648 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 POPDC2Q9HBU9 364 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 MED4Q9NPJ6 270 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 RRN3Q9NYV6 651 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 STAP1Q9ULZ2 295 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 VWA8A3KMH1 1905 aa17.62■□□□□ 0.41
COPS3-212ENST00000539941 CARNS1A5YM72 827 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 H7C4K7 107 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 MDM4O15151 490 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 ENDOD1O94919 500 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms