RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SWSAP1Q6NVH7 229 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 C15orf39Q6ZRI6 1047 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 MFSD6Q6ZSS7 791 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 CEP68Q76N32 757 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF589Q86UQ0 364 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 KBTBD6Q86V97 674 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 DGKHQ86XP1 1220 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 LRRC71Q8N4P6 559 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ARHGEF39Q8N4T4 335 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ENAHQ8N8S7 591 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 CMASQ8NFW8 434 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 TTC8Q8TAM2 541 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 PLEKHO2Q8TD55 490 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ING5Q8WYH8 240 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 FGF13Q92913 245 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 MCRS1Q96EZ8 462 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 TRMT2BQ96GJ1 504 aaKnown RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 RCC1LQ96I51 464 aaKnown RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 LRIG1Q96JA1 1093 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 SSBP3Q9BWW4 388 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 LRRCC1Q9C099 1032 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 TGIF2Q9GZN2 237 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 MAF1Q9H063 256 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ZBTB40Q9NUA8 1239 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 TBC1D13Q9NVG8 400 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 HCFC1R1Q9NWW0 138 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 PPP4R1LQ9P1A2 415 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 COA3Q9Y2R0 106 aaPredicted RBP3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 ZDHHC9Q9Y397 364 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 NLRC5Q86WI3 1866 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 PLXNA4Q9HCM2 1894 aa3.36□□□□□ -1.87
CHMP4A-208ENST00000534106 TEX15Q9BXT5 2789 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 RALGAPA2Q2PPJ7 1873 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 A0A0D9SFI3 127 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 A0A0U1RQF3 1178 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 SPAARA0A1B0GVQ0 90 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 K7ESF4 209 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 NRP1O14786 923 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 DCLK1O15075 740 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MUSKO15146 869 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ADAM12O43184 909 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 HMMRO75330 724 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 C22orf31O95567 290 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 GLUD1P00367 558 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 POMCP01189 267 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CAPNS1P04632 268 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ALDH2P05091 517 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF806P0C7X5 589 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CHRNB1P11230 501 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 RPS9P46781 194 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CXCL12P48061 93 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 SOX9P48436 509 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PPP2CBP62714 309 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 RPL11P62913 178 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PPP2CAP67775 309 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 RNASELQ05823 741 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 TROAPQ12815 778 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ITGB3BPQ13352 177 aaPredicted RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 DRP2Q13474 957 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 BMS1Q14692 1282 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 SF3A1Q15459 793 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ASPRV1Q53RT3 343 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CRB2Q5IJ48 1285 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 NOMO2Q5JPE7 1267 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 POMZP3Q6PJE2 187 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CRIP3Q6Q6R5 217 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PRSS55Q6UWB4 352 aaPredicted RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF852Q6ZMS4 543 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 Q6ZS52 159 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CYB5R4Q7L1T6 521 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PLPPR4Q7Z2D5 763 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MIB1Q86YT6 1006 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF654Q8IZM8 581 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 Q8N1X5 172 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CHCHD4Q8N4Q1 142 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 DEFB124Q8NES8 71 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CPLX3Q8WVH0 158 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 STAMQ92783 540 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PHKBQ93100 1093 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PGBD1Q96JS3 809 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CLIC6Q96NY7 704 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 RPS6KC1Q96S38 1066 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 SH2D3AQ9BRG2 576 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF747Q9BV97 191 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 OSBPL6Q9BZF3 934 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 AZI2Q9H6S1 392 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MRPL17Q9NRX2 175 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MIOSQ9NXC5 875 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 MAP3K20Q9NYL2 800 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 DNMT3BQ9UBC3 853 aaKnown RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CACNG4Q9UBN1 327 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC9A2Q9UBY0 812 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 FTSJ1Q9UET6 329 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 CDH7Q9ULB5 785 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 TIMM13Q9Y5L4 95 aaPredicted RBP3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 UBIAD1Q9Y5Z9 338 aa3.35□□□□□ -1.87
CHMP4A-208ENST00000534106 F5P12259 2224 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms