RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TM9SF1O15321 606 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 KCNN4O15554 427 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 PTPRAP18433 802 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 TCF7P36402 384 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 SERPINB4P48594 390 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 KDSRQ06136 332 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 TNFAIP1Q13829 316 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 WASHC2DQ5SRD0 308 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 CCDC62Q6P9F0 684 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 XYLT1Q86Y38 959 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 PDCD7Q8N8D1 485 aaKnown RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 TTC13Q8NBP0 860 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 SRPK1Q96SB4 655 aaKnown RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 STRIP2Q9ULQ0 834 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 OGTO15294 1046 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 CREB3O43889 395 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 FAM189A1O60320 539 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 APRTP07741 180 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 TAP1Q03518 808 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 ENPEPQ07075 957 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 LAMTOR4Q0VGL1 99 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 SNX30Q5VWJ9 437 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 PPP1R2P3Q6NXS1 205 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 CLPTM1LQ96KA5 538 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 ACO2Q99798 780 aaKnown RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 DHRS4Q9BTZ2 278 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 DCLRE1BQ9H816 532 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 PREBQ9HCU5 417 aa20.12■□□□□ 0.81
CAPN1-226ENST00000533820 PPARGC1AQ9UBK2 798 aaKnown RBP20.12■□□□□ 0.81
CAPN1-226ENST00000533820 H3BRJ5 948 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 NVLO15381 856 aaKnown RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 TNNC2P02585 160 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 HOXC6P09630 235 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 RGS7P49802 495 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 CCNG1P51959 295 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 TSNAXIP1Q2TAA8 658 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ZCCHC23Q6ZST2 131 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 POLNQ7Z5Q5 900 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ARID3BQ8IVW6 561 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 LMNTD2Q8IXW0 634 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 NIPA2Q8N8Q9 360 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 NRG4Q8WWG1 115 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 JDP2Q8WYK2 163 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ADPGKQ9BRR6 497 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 NRBP2Q9NSY0 501 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 NR2E3Q9Y5X4 410 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 MAD1L1Q9Y6D9 718 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 DLDP09622 509 aaKnown RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 TMPRSS15P98073 1019 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 CDK16Q00536 496 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 THOC5Q13769 683 aaKnown RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 APOPT1Q96IL0 206 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ZNF518BQ9C0D4 1074 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 SAR1AQ9NR31 198 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 PPP1R1BQ9UD71 204 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 WASF2Q9Y6W5 498 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 hCG_2014768A0A024R1R8 64 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 APOC4-APOC2K7ER74 178 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 APOC2P02655 101 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ATP6V1C1P21283 382 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 PTPN7P35236 360 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 RFC5P40937 340 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 RASA2Q15283 850 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 ZNF667Q5HYK9 610 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 TMEM154Q6P9G4 183 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 PTCD3Q96EY7 689 aaKnown RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 HEXIM2Q96MH2 286 aaKnown RBP20.11■□□□□ 0.81
CAPN1-226ENST00000533820 RHBDL2Q9NX52 303 aa20.11■□□□□ 0.81
CAPN1-226ENST00000533820 B2RBV5 119 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 ZNF189O75820 626 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 ATG7O95352 703 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 NFICP08651 508 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 PAX3P23760 479 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 OR6B2Q6IFH4 312 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 OXNAD1Q96HP4 312 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 NGRNQ9NPE2 291 aaKnown RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 PIH1D1Q9NWS0 290 aaKnown RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 DLGAP2Q9P1A6 1054 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 COL11A1P12107 1806 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 E7ESA3 106 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 TRAFD1O14545 582 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 TBX10O75333 385 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 AMPD1P23109 780 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 ETV4P43268 484 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 PRKD1Q15139 912 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 PPP6R3Q5H9R7 873 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 MROH9Q5TGP6 573 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 ENDOVQ8N8Q3 282 aaKnown RBP20.1■□□□□ 0.81
CAPN1-226ENST00000533820 CCDC110Q8TBZ0 833 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 ZFAND2BQ8WV99 257 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 SLC44A1Q8WWI5 657 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 STMN2Q93045 179 aa20.1■□□□□ 0.81
CAPN1-226ENST00000533820 GALNT8Q9NY28 637 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms