RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 BTKQ06187 659 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 BRD3Q15059 726 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 FAM153CQ494X1 144 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 AKNAD1Q5T1N1 836 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 FAXCQ5TGI0 409 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 CCDC28AQ8IWP9 274 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 C11orf44Q8N8P7 122 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 ACRBPQ8NEB7 543 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 TBC1D5Q92609 795 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 SARAFQ96BY9 339 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 MPHOSPH6Q99547 160 aaKnown RBP5.17□□□□□ -1.58
CD44-215ENST00000525241 PCDHAC1Q9H158 963 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 R3HDMLQ9H3Y0 253 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 RGL1Q9NZL6 768 aa5.17□□□□□ -1.58
CD44-215ENST00000525241 ARPP21Q9UBL0 812 aaPredicted RBP5.17□□□□□ -1.58
CD44-215ENST00000525241 ZMYND8Q9ULU4 1186 aaPredicted RBP5.17□□□□□ -1.58
CD44-215ENST00000525241 M0R3H8 397 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 SPRY2O43597 315 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 SNX2O60749 519 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 COQ9O75208 318 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 IGLV2-14P01704 120 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 HNRNPCP07910 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
CD44-215ENST00000525241 NPSP0C0P6 89 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 SETSIPP0DME0 302 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 EGR1P18146 543 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 MST1P26927 711 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 RBL1P28749 1068 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 PPM1AP35813 382 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 INHBEP58166 350 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 TBC1D25Q3MII6 688 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.16□□□□□ -1.58
CD44-215ENST00000525241 PCID2Q5JVF3 399 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 STRIP1Q5VSL9 837 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 ABLIM2Q6H8Q1 611 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 MRNIPQ6NTE8 343 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 FBXO42Q6P3S6 717 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 MTHFD1LQ6UB35 978 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 CLEC9AQ6UXN8 241 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 ARHGEF25Q86VW2 580 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 KRT73Q86Y46 540 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 ABHD11Q8NFV4 315 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 MBD3L2Q8NHZ7 208 aaPredicted RBP5.16□□□□□ -1.58
CD44-215ENST00000525241 ZG16BQ96DA0 208 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 C18orf8Q96DM3 657 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 STK33Q9BYT3 514 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 SLITRK6Q9H5Y7 841 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 CDC23Q9UJX2 597 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 CEP83Q9Y592 693 aa5.16□□□□□ -1.58
CD44-215ENST00000525241 ABHD14A-ACY1A0A1B0GW23 586 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 LRRC3CA6NJW4 275 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 HNRNPDLO14979 420 aaKnown RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 PDE8BO95263 885 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 IDEP14735 1019 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 GPD1P21695 349 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 FPR3P25089 353 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 SLC5A2P31639 672 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 IL6STP40189 918 aaPredicted RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 CYP4F2P78329 520 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 PSG6Q00889 435 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 CLCA4Q14CN2 919 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 MAPKAPK3Q16644 382 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 SLC5A9Q2M3M2 681 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 L1TD1Q5T7N2 865 aaKnown RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 ZNF804AQ7Z570 1209 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 AMIGO2Q86SJ2 522 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 PRIMA1Q86XR5 153 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 SPICE1Q8N0Z3 855 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 SIRT6Q8N6T7 355 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 BOLLQ8N9W6 283 aaKnown RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 SUN3Q8TAQ9 357 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 REPS1Q96D71 796 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 MACROD1Q9BQ69 325 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 TTLL2Q9BWV7 592 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.15□□□□□ -1.59
CD44-215ENST00000525241 ZCWPW1Q9H0M4 648 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 ARFGAP3Q9NP61 516 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 NECTIN3Q9NQS3 549 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 TM7SF3Q9NS93 570 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 LPAR3Q9UBY5 353 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 NKX1-2Q9UD57 310 aaPredicted RBP5.15□□□□□ -1.59
CD44-215ENST00000525241 STEAP1Q9UHE8 339 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 TAGLN3Q9UI15 199 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 AMFRQ9UKV5 643 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 DAAM1Q9Y4D1 1078 aa5.15□□□□□ -1.59
CD44-215ENST00000525241 OR2W5A6NFC9 320 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 A8MVJ9 347 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 PODXLO00592 558 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 CES2O00748 559 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 CBFA2T3O75081 653 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 PROP1O75360 226 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 FGAP02671 866 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 MYCLP12524 364 aaPredicted RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 CD19P15391 556 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 CREB1P16220 341 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 PECAM1P16284 738 aaPredicted RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 MCM5P33992 734 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 ELLP55199 621 aaPredicted RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 SUMO2P61956 95 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms