RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ARHGEF26Q96DR7 871 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 SLC22A12Q96S37 553 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 BAG1Q99933 345 aaPredicted RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 PDCL3Q9H2J4 239 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 POMKQ9H5K3 350 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 LRRC4Q9HBW1 653 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 WDR6Q9NNW5 1121 aaKnown RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 CNGB3Q9NQW8 809 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 TFR2Q9UP52 801 aa10.39□□□□□ -0.75
CLN8-202ENST00000517514 USP15Q9Y4E8 981 aaPredicted RBP10.39□□□□□ -0.75
CLN8-202ENST00000517514 CLUHO75153 1309 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 A0A1W2PRU2 124 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 C2orf78A6NCI8 922 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 RRM1P23921 792 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 GALCP54803 685 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 SLC8A3P57103 927 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 PITX1P78337 314 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 ZXDBP98169 803 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 SLC6A3Q01959 620 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 C1QBPQ07021 282 aaKnown RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 ZNF268Q14587 947 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 TEAD2Q15562 447 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 LEXMQ3ZCV2 418 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 PABPC1LQ4VXU2 614 aaKnown RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 CCDC122Q5T0U0 273 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 OTUD1Q5VV17 481 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 OR6B2Q6IFH4 312 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 ALKBH5Q6P6C2 394 aaKnown RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 JOSD2Q8TAC2 188 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 OVCA2Q8WZ82 227 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 IRGQQ8WZA9 623 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 HLA-CQ95604 372 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 MYADMQ96S97 322 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLN8-202ENST00000517514 FBXO44Q9H4M3 255 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 ASAH2Q9NR71 780 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLN8-202ENST00000517514 ADAM22Q9P0K1 906 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 TMEM59LQ9UK28 342 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 CEP83Q9Y592 693 aa10.38□□□□□ -0.75
CLN8-202ENST00000517514 EPN1Q9Y6I3 576 aaPredicted RBP10.38□□□□□ -0.75
CLN8-202ENST00000517514 EIF3CLB5ME19 914 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 AKR1B10O60218 316 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 GRAP2O75791 330 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 FBXO21O94952 628 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 NDUFA10O95299 355 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 OLFM2O95897 454 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TBX18O95935 607 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ABL1P00519 1130 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 OAS1P00973 400 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 SRGAP2BP0DMP2 458 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TFE3P19532 575 aaPredicted RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 NSFP46459 744 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 YWHAGP61981 247 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLN8-202ENST00000517514 SMAD4Q13485 552 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 SKIV2LQ15477 1246 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 RAB6CQ53S08 254 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 SYPL2Q5VXT5 272 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 BSPRYQ5W0U4 402 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 PLEKHA7Q6IQ23 1121 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ELMSAN1Q6PJG2 1045 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TOGARAM2Q6ZUX3 1019 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 SLC26A9Q7LBE3 791 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 MON1AQ86VX9 555 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 NPAS3Q8IXF0 933 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 SIX6OS1Q8N1H7 587 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ELMOD1Q8N336 334 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ZNF276Q8N554 614 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ACRBPQ8NEB7 543 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 RIN3Q8TB24 985 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 ING5Q8WYH8 240 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 WBP2Q969T9 261 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 VCPIP1Q96JH7 1222 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 CCDC42Q96M95 316 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 NOX5Q96PH1 765 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 SLC2A13Q96QE2 648 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 EIF3CQ99613 913 aaKnown RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 SLC46A2Q9BY10 475 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TRIM7Q9C029 511 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 RNF38Q9H0F5 515 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 RAB6CQ9H0N0 254 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 THAP2Q9H0W7 228 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 PIDD1Q9HB75 910 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 CALCOCO1Q9P1Z2 691 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 UXTQ9UBK9 157 aaPredicted RBP10.37□□□□□ -0.75
CLN8-202ENST00000517514 NUDT5Q9UKK9 219 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 COG5Q9UP83 839 aa10.37□□□□□ -0.75
CLN8-202ENST00000517514 TCF20Q9UGU0 1960 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms