RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TRMT61AQ96FX7 289 aaKnown RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 IL17FQ96PD4 163 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 F2RL3Q96RI0 385 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 FIZ1Q96SL8 496 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 LDAHQ9H6V9 325 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 BCO1Q9HAY6 547 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 CHST11Q9NPF2 352 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 MOCS1Q9NZB8 636 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 DNAJB11Q9UBS4 358 aa-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 SIRT4Q9Y6E7 314 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-542P-201ENST00000516405 NDUFAF8A1L188 74 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 TLR5O60602 858 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 LCATP04180 440 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 IGKV3-11P04433 115 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 CHRNB1P11230 501 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 MYCLP12524 364 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 KCNA6P17658 529 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 LPOP22079 712 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 POU6F2P78424 691 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 TRAF1Q13077 416 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 LARS2Q15031 903 aaKnown RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 UTP14CQ5TAP6 766 aaKnown RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 TAPT1Q6NXT6 567 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 CCDC82Q8N4S0 544 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 KIAA1958Q8N8K9 716 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 C7orf57Q8NEG2 295 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 SORCS1Q8WY21 1168 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 TRIB1Q96RU8 372 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 GAREM1Q9H706 876 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 SIRT3Q9NTG7 399 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZFP57Q9NU63 452 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 OCIAD1Q9NX40 245 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 PPP1R1BQ9UD71 204 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 PRSS50Q9UI38 385 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 GABRQQ9UN88 632 aa-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 RUVBL1Q9Y265 456 aaKnown RBP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.32□□□□□ -2.46
RNU6-542P-201ENST00000516405 E9PLN8 166 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 KIAA0391O15091 583 aaKnown RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 DIAPH1O60610 1272 aaKnown RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC43A1O75387 559 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC9A1P19634 815 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 CD6P30203 668 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 MECP2P51608 486 aaKnown RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 PSG6Q00889 435 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 PPARAQ07869 468 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 NFATC2Q13469 925 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 SMTNL2Q2TAL5 461 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMEM177Q53S58 311 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 MTHFD1LQ6UB35 978 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC26A9Q7LBE3 791 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 NAA40Q86UY6 237 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 MARCH9Q86YJ5 346 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 LSM14AQ8ND56 463 aaKnown RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 GRAPLQ8TC17 118 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 XAGE5Q8WWM1 108 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 R3HDM4Q96D70 268 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 CCDC97Q96F63 343 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 LINC00479Q96M42 142 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 VKORC1Q9BQB6 163 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 TM2D2Q9BX73 214 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF334Q9HCZ1 680 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 AJAP1Q9UKB5 411 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 USTQ9Y2C2 406 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 SLC6A5Q9Y345 797 aa-0.33□□□□□ -2.46
RNU6-542P-201ENST00000516405 FER1L4A9Z1Z3 1794 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PRSS38A1L453 326 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 A1L4Q6 167 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 H7C423 109 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 AGRPO00253 132 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 AKAP10O43572 662 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 SPRY3O43610 288 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PHF2O75151 1096 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 DDAH1O94760 285 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 HAUS5O94927 633 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PLAUP00749 431 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 FGAP02671 866 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 APEHP13798 732 aaKnown RBP-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 DGKAP23743 735 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ADPRHP54922 357 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 XGP55808 180 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 CYP1B1Q16678 543 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 C4orf46Q504U0 113 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMEM65Q6PI78 240 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 Q6ZTK2 550 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PQLC1Q8N2U9 271 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PAQR4Q8N4S7 273 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 TMEM174Q8WUU8 243 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 GLG1Q92896 1179 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF653Q96CK0 615 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ZNF496Q96IT1 587 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 RADILQ96JH8 1075 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ELF4Q99607 663 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ELOVL1Q9BW60 279 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 IMPG2Q9BZV3 1241 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 ISCUQ9H1K1 167 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 EPN3Q9H201 632 aa-0.34□□□□□ -2.46
RNU6-542P-201ENST00000516405 PCIF1Q9H4Z3 704 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms